Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g2127 ATGGCCTGTTCCCTTTTTGATATATGGACTGAAATAAAAAGAACAAAGTTTGAAACTTTATTATGTTATCTTTCCTGTTCTGTAGTTCTCATGGACGATGATGCGTTGAATATGCGCAATTGGGGTTATTATGAACCCTTCAAAGGGGGGCATCTTGGTCTGCAGCTCATGTCAAGTATGACAGATCGTGACACTAAACCGTTTTTGCCAGGCCGTGATCCTACTATGTTGGTTAGTGCAAATGGAACCTTTCACCCTCGTGATTGTGTTGTTTCAGAAGCACCAATTCCAATGAACTATGTCAGAGATAGTTGGATAAGCCAGAGAGATAGGTATCTCAATATGATGCCCACAAATCCTAATTATGCTGTTCTTCCAGAAACGTCAGGATCTCCCACCTTGCAAATTATACAGCCACCTTCTACATCGCGAGATGATAGGGTGAATCGAATTGAAGACCCTTCTGTTAAGAAGGAAGGTGGCCAATTGAAGAAAAGGCAGGGAGGGGGTGCTCCAAAGACTCCAAAAGCAAAAAAACCTCGGAAGCCAAAGGATAATAGCAATGCTTTAGTTCAACGTGAGAAGCCTGCTAGGAAGGCTATGGAGGTTGTAATAAATGGAATTGATATGGACATTTCTGGTCTACCCATTCCAGTTTGCTCATGTACTGGGGCTCCTCAACAGTGTTACCGATGGGGCTGCGGTGGTTGGCAATCAGCATGTTGTACCACAAATGTGTCAATGTATCCTTTGCCAATGAGCACTAAAAGGCGTGGTGCAAGGATAGCTGGACGGAAAATGAGTCAAGGTGCTTTTAAGAAGGTTTTGGAGAAACTTGCAGCTGAAGGTTATAATTTTGCTAATCCTATTGATCTGCGGACTCACTGGGCTCGACATGGCACCAACAAGTTTGTCACCATCAGGTAG 927 0.4358 MACSLFDIWTEIKRTKFETLLCYLSCSVVLMDDDALNMRNWGYYEPFKGGHLGLQLMSSMTDRDTKPFLPGRDPTMLVSANGTFHPRDCVVSEAPIPMNYVRDSWISQRDRYLNMMPTNPNYAVLPETSGSPTLQIIQPPSTSRDDRVNRIEDPSVKKEGGQLKKRQGGGAPKTPKAKKPRKPKDNSNALVQREKPARKAMEVVINGIDMDISGLPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLRTHWARHGTNKFVTIR 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g2127 308 Pfam GAGA binding protein-like family 31 308 IPR010409 -
Glsi09g2127 308 SMART GAGA_bind_2 31 308 IPR010409 -
Glsi09g2127 308 PANTHER - 31 308 IPR010409 -
Glsi09g2127 308 MobiDBLite consensus disorder prediction 145 164 - -
Glsi09g2127 308 MobiDBLite consensus disorder prediction 123 196 - -
Glsi09g2127 308 MobiDBLite consensus disorder prediction 123 144 - -
Glsi09g2127 308 MobiDBLite consensus disorder prediction 181 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g2127 Glsi-ChrGlsi09 61633816 61634975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g2127 31 308 BBR or BPC Transcription factor family AT2G01930 58.249 1.58e-109 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Glsi09g2127 GAGA_bind 1.5e-112 No_clan