Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g2125 ATGGAAGATCAGCTTCAACACCAACCGCGTGCAGAGCGATTCAACCTCATCAAGTTAATTGCACATGCTGGTGCAAATTATGTTGGCTCTATGTATAAATCGATCACGCACCTGATTTGTTGGGACTTTGAAGGCAAGAAATATGATCTTGCACAGAAATTCAAAACAATTATAGTAAACCACCAATGGGTTGAAGACTGCATAAAGCAAGGAAGGCGTGTTCCAGAGGAATCTTATATACTGAAAAGCGGACAAGAAGTAGGACCACTATCACTGGAAGTTCCACTCATTGTTCAGGCAAGTAGCTTGACTAAGAATAAAGTGCCTGGTGATAGATCAGATGACATTGGCTCCAAAAAACAAACAACTGAGTTCAGTTCTGGTGCTTCTGAAAATTCTGTTTGGGATGATTCTTGTTTAATGAACAAGATGGTTTCTGTTTCCAATGCCATTAAAATCTGTGGTCTGGTTGGCATGGGGTTGAAGTTAAAGCATATGCCTGCTAGGAATAATGATCAGAATGTGCTTGAAAAATCTTGGAAACATCTCTACCATGAGGAGCCAATAACTTCTTCTAGACAGTCAAGGAAAGCAAAAAGAAAGATCTCCGATAGCAGTGGAATGGCTACTTCAGCTGAAGGGCTGCTAATGCTGTGCTCTGCATTTACTGCTGCAGCATTGGTTTTCCAAAAATCCAACCCTCAAACTAGAGAGCATTACCGGTAG 726 0.4118 MEDQLQHQPRAERFNLIKLIAHAGANYVGSMYKSITHLICWDFEGKKYDLAQKFKTIIVNHQWVEDCIKQGRRVPEESYILKSGQEVGPLSLEVPLIVQASSLTKNKVPGDRSDDIGSKKQTTEFSSGASENSVWDDSCLMNKMVSVSNAIKICGLVGMGLKLKHMPARNNDQNVLEKSWKHLYHEEPITSSRQSRKAKRKISDSSGMATSAEGLLMLCSAFTAAALVFQKSNPQTREHYR 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g2125 241 Gene3D BRCT domain 5 86 IPR036420 -
Glsi09g2125 241 PANTHER F5A8.9 PROTEIN 12 206 - -
Glsi09g2125 241 MobiDBLite consensus disorder prediction 106 133 - -
Glsi09g2125 241 Pfam twin BRCT domain 11 63 IPR001357 -
Glsi09g2125 241 SMART BRCT_7 2 71 IPR001357 -
Glsi09g2125 241 ProSiteProfiles BRCT domain profile. 1 81 IPR001357 -
Glsi09g2125 241 SUPERFAMILY BRCT domain 10 82 IPR036420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g2125 Glsi-ChrGlsi09 61114271 61120365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g2125 35 87 Core DNA Replication Machinery Family AT4G02110 51.852 2.18e-12 64.7