Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g2083 ATGCCTACATTGGCATATTCTGCTCCTGTCGTGGCCTTTGTTGCTGGATTATCTACACTAAATCCATTGTTCTGCTCTTGTCGTAGCCTTTGCTATCGTTGGTATTGCAAAGCTCTCCATAAACCTTTGCATTGTTATGCTTTGCTCCTGTCACAAGTTGCTTTGCCCTTGTTACAGCTGTGCAAGTCTGTTTCCATGCTCTACGATGGTTGGTTAGACTGCCCAGCATATGGTCAAGAAATAGGATGCATAATCCCTTCAAAGGTTCCACTTGGTGAATCCTTCAATGATATCATTCCAAGTCAATTTTACAGATCGATAAGATGCAAAGGAAGAGATTCTGTACCTGATGATGAATCTGTAAACAAATTTTACAATGAGGTTCTTGATTTTTCCTCCCAAAGAACAAACACAAAGAAATATATACTTGTGCATTGCACACATGGGCATAATCGAACTGGTTATATGATTGTTCATTTTCTTTTGCGCACGGAATCAATTTCTGTCACTGAGGATTATATTGATGCTCTTTACATGTATTATCATGAAAAGAAGCCTGAAGAAGTTGTTTGTCCTCAAACTCCAGAATGGAAGAGACTTTCTGATCTTGATTTTCATGGTGCTGTTGTCCCAACTGTAGAAAATTGTGGAGATGTTCCTCTGCATGTATGTGATTTATTCCTTATTGAGGGACATGCTTTTGTTTAG 708 0.3884 MPTLAYSAPVVAFVAGLSTLNPLFCSCRSLCYRWYCKALHKPLHCYALLLSQVALPLLQLCKSVSMLYDGWLDCPAYGQEIGCIIPSKVPLGESFNDIIPSQFYRSIRCKGRDSVPDDESVNKFYNEVLDFSSQRTNTKKYILVHCTHGHNRTGYMIVHFLLRTESISVTEDYIDALYMYYHEKKPEEVVCPQTPEWKRLSDLDFHGAVVPTVENCGDVPLHVCDLFLIEGHAFV 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g2083 235 ProSitePatterns Tyrosine specific protein phosphatases active site. 144 154 IPR016130 GO:0016311|GO:0016791
Glsi09g2083 235 PANTHER MRNA-CAPPING ENZYME 70 101 - -
Glsi09g2083 235 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 122 171 IPR000387 GO:0016311|GO:0016791
Glsi09g2083 235 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 69 198 IPR029021 -
Glsi09g2083 235 Gene3D Protein tyrosine phosphatase superfamily 60 204 IPR029021 -
Glsi09g2083 235 Pfam Dual specificity phosphatase, catalytic domain 101 173 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g2083 Glsi-ChrGlsi09 48081600 48087111 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g2083 65 210 Protein tyrosine phosphatase (PTP) family AT5G01290 45.366 1.01e-49 170