Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g2082 ATGCATTCCCACATTGCCTATCATCCTAACACCATGACACAACCTAGCAATCTCAACCTAACCTCTGCCTGCTTCTCCGAACACCTCGCCACCAGGAACTTGTTCTCCAGCCACCTCTTTTTCGTGCAAGATGTCCAAGTTCTGGAGATTCTCATTGCAGCCATAATCTTCATAATCATCCATTCTGTGAGGCAAAGGAAGCACCATGGCCTGCCCGTTTGGCCAGTCCTTGGAATGTTACCTTCCTTGCTCGCCGTACTCAGAATCAACATGTATGAGTGGATCTCCGATGTACTTAACCAGCAAAATGGCACGTTTAGGTTCAAAGGGCCTTGGTTTAGTAGCCTCAACTGCATTGTCACCTCTGATCCTCGCAATCTTGAGCATCTTCTCAAAACTAGGTTTCTTGTTTTCCCCAAAGGAAGTTACTTCAGGGACACTGTTAGGGACCTTCTTGGTAATGGTATATTCAATGCAGATGAGGAGACATGGCAGAGACAAAGGAAGACAGCAAGCATTGAATTTCATTCGAAAAAATTCAGGAACTTGACCACAGAGTCCTTGTTCGGGCTTGTCCACTCCAGGCTCCTACCTGTCTTGGAAGCATCAGTTAAGAAATCAATGTCCATAGACCTGCAAGACATCCTGCTAAGGCTGACATTTGACAATGTATGTATGATAGCCTTTGGTGTTGATCCAGGATGTTTAAGCCTGGGATTACCTGAAATTCCATTTGCCAAAGCCTTTGAGGATGCAACAGAAGCCACAGTGCTTCGTTTTGTTACACCAACATGTATATGGAAGGCGTTGAGGTATCTCAACTTGGGGATGGAAAGAAAGCTGAAGAAATCAATAAAAGGAGTCGATGAATTCGCCAAGAATGTCATTCAGACAAGGAAGAAAGAGCTGTCTTTGCCTTGTGTGGATAAGGAGAAGCAAAAGTCAGACTTGTTAACAGTGTTTATGGGTCTGAAGGATGAGAATGGACAACCTTATTCTGACAAGTTCTTAAGGGATATATGCGTGAACTTCATATTAGCAGGGAGGGACACTTCTTCAGTAGCTTTGAGCTGGTTTTTCTGGTTGCTTGATCAGAATCCTGCAGTGGAGGAGAGTATACTAGCAGAGCTATGCAGGATACTGAGTCAGAGGGAAGAGGTGACGGGAGAAGAGTTTGAAAGTTCAGTGACATTTAGGCCTGAGGAGATAAAGAAGATGGATTATTTGCAGGCTGCACTATCAGAGGCTCTAAGATTATATCCTTCTGTCCCTGTGGATCACAAGGAGGTGCTTGAGGATGACACTTTTCCAGATGGAACAGTGCTAAAGAAGGGCACCAAAGTGATCTATGCAATTTATGCAATGGGGCGAATGGAAGGCATATGGGGAAAGGACTGCAGGGAGTTCCGCCCAGAGAGATGGTTAAGAGATGGTCGTTTCATGAGTGAGTCTGCCTACAAATTCACCGCCTTCAATGGTGGACCTCGCCTTTGCTTAGGCAAGGATTTCGCATATTACCAGATGAAATATGTTGCTGCAAGCATCATATACCGGTACCGAGTGAAGGTGGTTGAGAACCACCCTATTCTGCCAAAGCTTGCATTAACTATGTACATGAAGCATGGCTTGAAAGTTAACTTTTACAGGAGGGATGCTGCAGAGCTTCAAAAATACTTTCAGATTAGTTAA 1689 0.4458 MHSHIAYHPNTMTQPSNLNLTSACFSEHLATRNLFSSHLFFVQDVQVLEILIAAIIFIIIHSVRQRKHHGLPVWPVLGMLPSLLAVLRINMYEWISDVLNQQNGTFRFKGPWFSSLNCIVTSDPRNLEHLLKTRFLVFPKGSYFRDTVRDLLGNGIFNADEETWQRQRKTASIEFHSKKFRNLTTESLFGLVHSRLLPVLEASVKKSMSIDLQDILLRLTFDNVCMIAFGVDPGCLSLGLPEIPFAKAFEDATEATVLRFVTPTCIWKALRYLNLGMERKLKKSIKGVDEFAKNVIQTRKKELSLPCVDKEKQKSDLLTVFMGLKDENGQPYSDKFLRDICVNFILAGRDTSSVALSWFFWLLDQNPAVEESILAELCRILSQREEVTGEEFESSVTFRPEEIKKMDYLQAALSEALRLYPSVPVDHKEVLEDDTFPDGTVLKKGTKVIYAIYAMGRMEGIWGKDCREFRPERWLRDGRFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASIIYRYRVKVVENHPILPKLALTMYMKHGLKVNFYRRDAAELQKYFQIS 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g2082 562 CDD CYP86A 106 543 - -
Glsi09g2082 562 Gene3D Cytochrome P450 58 555 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g2082 562 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 491 500 IPR017972 GO:0005506|GO:0016705
Glsi09g2082 562 PANTHER CYTOCHROME P450 60 545 - -
Glsi09g2082 562 FunFam Cytochrome P450 62 553 - -
Glsi09g2082 562 SUPERFAMILY Cytochrome P450 70 550 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g2082 562 Pfam Cytochrome P450 75 536 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g2082 562 PRINTS E-class P450 group I signature 356 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g2082 562 PRINTS E-class P450 group I signature 336 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g2082 562 PRINTS E-class P450 group I signature 488 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g2082 562 PRINTS E-class P450 group I signature 498 521 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g2082 562 PRINTS E-class P450 group I signature 410 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g2082 562 PRINTS P450 superfamily signature 347 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g2082 562 PRINTS P450 superfamily signature 489 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g2082 562 PRINTS P450 superfamily signature 498 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi09g2082 562 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g2082 Glsi-ChrGlsi09 47463699 47466585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g2082 17 562 Cytochrome P450 AT5G23190 72.761 0.0 828