Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g2077 ATGTTCCTTTCGGTCCTTTTCCTCACTGTGACACTCTTCCATCCTGATTACACACACTTCCCACAATACACTGTTGCAGGACATCGGTCTTTCTCTAAAATTATTACTAAAACACTATGGAAGAGTACAGATAGATCTTCCATTATAGAGGCTCTGGAGCTGGAATTAGCACTTGCACCATGTGTACCTATTGAAGAGCCCTACTTAAAGAAGAAAATCAAAGATCTGGCCCTAAAAGGATTTGAAGCTATTTTTAGTAGGATTGTGAACATTCTAATATGCATTGAAGGATTACACTTTGTCTACGCTCTGTGTCTCTTGTTATGGAAACCAAATCAAGTGAAAGATTTCACTAACGATTATGTGTTTAAAGACCCATCCCCCCAGCATTATCGATTTCTTGGGTCTCTAGTGATGGAACTTCTGGTGACAAGGTCTTCTGTTTTCTTTGTTATTTTTTTCTCTCTACTCTGTCTCCTCCTTCAGCCTGTTAGATCAAGAGATGATGCTCGAGCACTTTTAGCACTCAAATCCTCCATTGATGTTCAGAACAAACTTCCATGGCAAGTAGGAAGCAATGTCTGCAACTGGGAAGGGGTCAGGGATTGCTTTAACGGAACGGTCCGAAAGCTAGTGCTAGAGAACTTAAACTTAACCGGCACTTTGGACCCCAAGATCCTGAACCGATTGGATCAACTTCGTGTACTCAGTTTCAAAAGCAACTCACTTTCTGGTCTAATCCCTGATCTATCTGGCTTGGTCAATCTGAAATCCATATTTCTCAATGACAACAACTTCTCCAGCGAGTTCCCCTCTTCCATCTCCGGCCTCCACCGCGTGAAAGTTATAGTTTTTTCCGGGAACCAAATCTCTGGCAACATCCCGGCGTCGCTGCTCAAGCTCCGGCGTCTCTACATCCTTTACTTGCAAGACAACTTGTTCACAGGACCCATACCTGCTTTCAACCAAACCAGTCTCCGATATCTGAATGTCTCCAACAACCAACTGTCCGGCGAGATCCCGGTAACCCCAGCTTTGATCCGTTTCAATACGTCCTCGTTTTTAGGCAACCCAAGTCTCTGTGGCGAACAGATCCACAAGGCATGCGAAAGCGGCCATGCCTTGCCACCCTTGGTTAGCCCCAGTTATCCCTTGATACCAGGGAATACCGAGGCATCATCATCATCTTCTCAACACATGAAATTGATCAAAATAATAGCAGGGAGTATCGGAGGGTTCATGCTGCTTCTGATTTGCTTGTTTCTGATATGGATGATTTGTAGGAATTGTAGGAAAGGGAAGGGTTCGAGGACAAGGCGCAAGGGGGTTGGTATTGGTAGCATTGAGAGAGGAGAAGAGGGTGCACCACCAGCAACAACAACTGGGAGTGGGAGTGGCAGAGGAGGTAATAATGGGGGAAAACAAGGGGTGTTTGCATGGGAAGGTGAGGGACTTGGTAAATTGGTGTTCTGTGGAGCAGGGGATAGGGAGATGAGTTATAGCTTGGAGGATTTGCTCAAGGCATCAGCAGAGACATTGGGGAGGGGTAGTATGGGAAGTACCTATAAAGCAGTGATGGAGTCTGGGTTTATATTGACCGTGAAGAGGTTAAAGGATGCTAGGTACCCCGGGTTAGAGGAGTTCAGGAGACAGATGGAGCTGCTAGGGAGGCTTAGGCACCCTAATCTGGTCCCACTTAGGGCTTATTTCCAGGCTAAGGAGGAACGCCTTCTCGTTTATGATTACTTCCCGAATGGCAGCCTCTTCTCCCTCATTCATGGATCAAAAACTTCTGGTGGGGGAAAGCCTCTTCACTGGACATCATGCCTTAAAATTGCTGAAGACCTAGCCACTGGTCTCCTCTTTATCCACCAGAAGCCTGGGTTAACCCATGGGAACCTGAAATCTTCTAATGTCTTGCTGGGTTCTGACTTCGAGTCTTGTCTTACTGATTATGGTCTCACATTGTTCCTTAATCCTGATTCACTAGAAGAACCCAGTGCCACCACTTTATTCTACAGAGCACCTGAATGCCGTAGCATCCGGAGGCCACCCACTCAACAAGCTGATGTATACAGCTTTGGGGTCCTTCTTCTGGAACTCTTGACAGGGAAAACACCCTTCCAAGACCTCGTTCAGGAACATGGTTCAGATATACCGAGGTGGGTTCGGTCTGTCCGTGAAGAAGAGACTGAGTCTGGGGATGACCCTGTCTCAGGCAATGCAGCATCAGAAGAGAAGCTTCAGGCTCTTTTGAACATTGCGATGGTTTGTATTTCACTTGTACCAGAAAACAGACCCACAATAAGGGAAGTTTTAAAGATGATAAGAGATGCAAGGGCTGAGACTCAAGTGTCATCAAACAGTAGTGATCATTCTCCCGGTAGATGGTCAGATACTGTTCAAAGCTTACCTAGGGAAGATCATTTGAGCATATGA 2439 0.46 MFLSVLFLTVTLFHPDYTHFPQYTVAGHRSFSKIITKTLWKSTDRSSIIEALELELALAPCVPIEEPYLKKKIKDLALKGFEAIFSRIVNILICIEGLHFVYALCLLLWKPNQVKDFTNDYVFKDPSPQHYRFLGSLVMELLVTRSSVFFVIFFSLLCLLLQPVRSRDDARALLALKSSIDVQNKLPWQVGSNVCNWEGVRDCFNGTVRKLVLENLNLTGTLDPKILNRLDQLRVLSFKSNSLSGLIPDLSGLVNLKSIFLNDNNFSSEFPSSISGLHRVKVIVFSGNQISGNIPASLLKLRRLYILYLQDNLFTGPIPAFNQTSLRYLNVSNNQLSGEIPVTPALIRFNTSSFLGNPSLCGEQIHKACESGHALPPLVSPSYPLIPGNTEASSSSSQHMKLIKIIAGSIGGFMLLLICLFLIWMICRNCRKGKGSRTRRKGVGIGSIERGEEGAPPATTTGSGSGRGGNNGGKQGVFAWEGEGLGKLVFCGAGDREMSYSLEDLLKASAETLGRGSMGSTYKAVMESGFILTVKRLKDARYPGLEEFRRQMELLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLFIHQKPGLTHGNLKSSNVLLGSDFESCLTDYGLTLFLNPDSLEEPSATTLFYRAPECRSIRRPPTQQADVYSFGVLLLELLTGKTPFQDLVQEHGSDIPRWVRSVREEETESGDDPVSGNAASEEKLQALLNIAMVCISLVPENRPTIREVLKMIRDARAETQVSSNSSDHSPGRWSDTVQSLPREDHLSI 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g2077 812 MobiDBLite consensus disorder prediction 441 473 - -
Glsi09g2077 812 Pfam Protein kinase domain 510 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g2077 812 Gene3D Transferase(Phosphotransferase) domain 1 583 800 - -
Glsi09g2077 812 SUPERFAMILY L domain-like 166 362 - -
Glsi09g2077 812 SUPERFAMILY Protein kinase-like (PK-like) 511 788 IPR011009 -
Glsi09g2077 812 Gene3D Phosphorylase Kinase; domain 1 492 582 - -
Glsi09g2077 812 FunFam Leucine-rich repeat receptor-like protein kinase 279 371 - -
Glsi09g2077 812 MobiDBLite consensus disorder prediction 783 812 - -
Glsi09g2077 812 Pfam Leucine rich repeat N-terminal domain 168 201 IPR013210 -
Glsi09g2077 812 Pfam Leucine rich repeat 255 313 IPR001611 GO:0005515
Glsi09g2077 812 Gene3D Ribonuclease Inhibitor 323 372 IPR032675 -
Glsi09g2077 812 Gene3D Ribonuclease Inhibitor 166 322 IPR032675 -
Glsi09g2077 812 ProSiteProfiles Protein kinase domain profile. 507 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g2077 812 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 155 783 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g2077 Glsi-ChrGlsi09 45788626 45793356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g2077 142 812 Receptor kinase-like Gene Family AT1G60630 60.530 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi09g2077 Pkinase 2e-35 CL0016