Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g2055 ATGGCTACGAAACGTGCTTGTCCTTTGGATGAACCACCCACAGCTTCATCCGAAGAAGAGGAAGCTTCATCTGAAGAGGAAGATGAAGAAGACGATGAACCGGAAAAACCATTTTCCACTTTGCCAGCCCCTGCTGCTGAGAAGAAACCCAGTTCCAAAAAGTCGCCAACTCCTGCTACAAAATCTGAACCAAAATCTTCATCTTCGGAATCAGGGACAGAATCCGATTCGGTATCGAACTCCGAAGATGAGCGACCCAGTGGGAGTACGGACCCAAAAATTAAACTGATTGCGTTCAAGCCCATGAAAGAAACCCCAAAGGTCAAGAAGCCCAAGTCCCAGCCCTACGCTACGCCAGCCAGATCGGCAACGAAGCGCCCAAATGAGAAGAATTGGCCAGTAAGTGACTCGAAAAGGGCCAAGAAGAAGGGCACGGATGGTGCCGGTGATGACGAGATCCCGGTGGCAGAGAGCGATACGAAGAATTCTGGGGATGATTCCAAGAAACTCTTTCAGAGGCTGTGGAGTGAAGACGATGAAATTGCGATACTCGAGGGCATGGTTGAATATTCGGCGAAGACTGGAGCAAACCCAGGTAAGGATATGAATGCATTTCACGATTTCATCAAGACATCGCTTCATGTTGATGTTTCAAGGTCACAATTGATGGATAAGATCCGTAGACTGAAGAAGAAGTATGAGAATAATGCAGGGAGAGGCAAAAAGGGTAAGGACCCGAGTTTTTCGAAACCACACAACAAGAAAGCCTTTGAATTATCGAAGAAGATCTGGGCCACTGAAAGAGACAACGGAGGAATAGAATATACGAAGTCTAATGCGAAAGATGGGAAAAGTCAGGAGGAATGTAGTAGGACCATGACAACTCCGAAAGCAAAAGCTGAGCTGGAATCAGAGCTGGAATCAAAGGAAGCTAGAAAGATTGATATTGATCAAAATGCTGGCTCATCGCTGAGTTTAAGTGAAATGATTCGGTTTGACAAAATTCTGGGTCTATCAGGGTTGGACGAGGATGCTATAAAGAGGGGATTCGAAGTGATTGGAGCATCACAGAGGGCAGAGTTGGAGGAGAGGTGGAAGAAACTGCAATTTTCTGAATTGGATCATTTTGTGAAGCGAGCAGAACTAATTAAGGATCAAGCTTTGTTGATATGGGAGGCATACAAGTCATCAAACTGTTAG 1200 0.4567 MATKRACPLDEPPTASSEEEEASSEEEDEEDDEPEKPFSTLPAPAAEKKPSSKKSPTPATKSEPKSSSSESGTESDSVSNSEDERPSGSTDPKIKLIAFKPMKETPKVKKPKSQPYATPARSATKRPNEKNWPVSDSKRAKKKGTDGAGDDEIPVAESDTKNSGDDSKKLFQRLWSEDDEIAILEGMVEYSAKTGANPGKDMNAFHDFIKTSLHVDVSRSQLMDKIRRLKKKYENNAGRGKKGKDPSFSKPHNKKAFELSKKIWATERDNGGIEYTKSNAKDGKSQEECSRTMTTPKAKAELESELESKEARKIDIDQNAGSSLSLSEMIRFDKILGLSGLDEDAIKRGFEVIGASQRAELEERWKKLQFSELDHFVKRAELIKDQALLIWEAYKSSNC 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g2055 399 MobiDBLite consensus disorder prediction 275 298 - -
Glsi09g2055 399 PANTHER BNAANNG10740D PROTEIN-RELATED 13 387 IPR007592 GO:0006355
Glsi09g2055 399 MobiDBLite consensus disorder prediction 53 76 - -
Glsi09g2055 399 Coils Coil 299 319 - -
Glsi09g2055 399 MobiDBLite consensus disorder prediction 1 167 - -
Glsi09g2055 399 MobiDBLite consensus disorder prediction 131 167 - -
Glsi09g2055 399 MobiDBLite consensus disorder prediction 230 252 - -
Glsi09g2055 399 MobiDBLite consensus disorder prediction 14 35 - -
Glsi09g2055 399 Pfam Protein of unknown function, DUF573 171 264 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g2055 Glsi-ChrGlsi09 40003867 40005066 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g2055 3 396 GeBP Transcription Factor Family AT1G61730 34.398 2.21e-43 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Glsi09g2055 DUF573 4.5e-37 CL0123