Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g2054 ATGAATGTCATTAGTGTTAGGACCCCTATAAAGCACGTGTATAAAAGGAAGAACCATAGGACCACTACTGTTGGGGAGGTGAATGGGATGAGCACTAAAAAAATATGTGACAAAGGTGGGAATGCTGAAAAGGATAGCTGGCCAATAGAAAAAGGGCAACCTGACAATATTGTTACAGCCAGGAAGGATAAAGAGAGGAGCAAGAGGCAGGGCGAGGATGTGATGGAGCTACAGAGGGTGGCATTTGTGCCTGCTGCAAATGGAACACGCCTGGTGACTGCCAATTCTCTTTTTGTGCGTTTGATGATCAATTTGTCTCCATTTGCTTTTGAACTTCCTACAGTATATCTACCATTTGTGAAGATTCTTAAAGATTTGGGCCTTCAGGACACACTAACACTTTCTTCTGCGAAGGATCTTCTTTTAAATCTTCAGAAAGCTTGTGGATATCAGCATTTAAATCCAAATGAGTTACGTGCAGTGATGGAAATTTTGAGTTTTATATGTGATCAGATTATTGAAGGGAACATACTTAATAGGTCTAGATGGAAAACGGAAGCCATAGTTCCTGATGATGGCTGCAAACTTGTTCATTCAGCATCCTGTGCCTATGTTGATTCCCGTGGTTCCCGATATGTCAAATGCATTGATACTTCAAAAATAAGATTTGTCCACCCTGATCTTTCTGAGCAAGTATGTAATGTCCTGGGCATCAAAAAATTGTCCGAAGTTGTCATCGAGGAACTAAATGAGAATGAGGAGTTACAGACTTTAGAATCCGTGGGGTCTGTTTCACTAGTGGCCATCAAACAGAAGCTTTCAAGCAGATCACTTCAGGTTGCTGTATGGACCGTTGTTAATAGCATGGGCAGTTACATTCCTGCAATTAATAGCATAGCATTGGATACAATACAATCCTTGTTGAAATCTACTGCAGAAAAGCTGCAATTTGTTAAACATCTTAAAACAAGGTTTCTGCTCCAGCCTAGTTTAGTAGATATTACATGTGCAGCTAAAGATTTCATCATACCAGAGTGGGAGGGTGAATCTGTACATCATACTCTTTATTTTGTGAACCAATCAAGATCCTGTATTCTAGTTGCAGAACCACCATCTTATATTTCTATTTTTGATCTCATTGCTATTGTTGTCAGCCAGATTTTAGGCTCTCCTACTGTATTGCCTATTGGATCCTTATTTGTTTGTCCTGAAGGATCAGAGATTGCAGTTGTTAATGTCTTAAAACTTTGCTTGGACAAGAAAGAAGTTGAACCCATAAGTGTAAGCAGTAATTTGATGGGCAAAGAAATAATGCCCCAAGATGCCCGCCTTGTGCAGTTCCATCCTTTGAGGCCCTTTTATTCAGGGGAAATAGTGGCTTGGCGGTCTCAAAATGGAGAAAAGCTAAAATATGGTAAGGTTCCTGAGGATGTCAGACCATCAACAGGCCAAGCTCTATACAGATTTAAGATCGAAACTGCACCAGATGTTACACAGGTTTTACTTTCTTCACAAGTTTTTTCATTTAAAAGTAGAGCAGCAAGCAGTCCTATATCAGAAATCTTGGTGGATGATAGCCCTGTAGTGAGCAGTAACAAACCTCATGTTGAGGTGTCAGAGAGTTTGGGAAGGGGCAAAAGCTGCTCTCAGCCTCTGAGAGAAGTGCAGTATGGCAAAGTTTCAGCTGCAGAATTGGTACAGGCGGTTCATGAAATACTCTCTGCTGCTGGGATCAATATGGATGTGGAAAAGCAGTCTCTAATTCAGAGAACAATAAATTTGCAAGAAACACTTAAAGAATCTCAAGCAGCACTTCTATTGGAGCAGGAAAGGGTTGAAGTGGCAGCAAAAGAGGCTGATACAGCAAAAGCAGCATGGCTTTGTCGGGTTTGTCTGACAGCTGAAGTTGATATTACAATAGTGCCTTGTGGTCATGTACTTTGTCACAAATGCTGTTCTGCAGTATCAAAGTGTCCATTTTGTCGGCTTCAGGTTACCGAAACGATTAGAATCTTCCATCCATAG 2025 0.4089 MNVISVRTPIKHVYKRKNHRTTTVGEVNGMSTKKICDKGGNAEKDSWPIEKGQPDNIVTARKDKERSKRQGEDVMELQRVAFVPAANGTRLVTANSLFVRLMINLSPFAFELPTVYLPFVKILKDLGLQDTLTLSSAKDLLLNLQKACGYQHLNPNELRAVMEILSFICDQIIEGNILNRSRWKTEAIVPDDGCKLVHSASCAYVDSRGSRYVKCIDTSKIRFVHPDLSEQVCNVLGIKKLSEVVIEELNENEELQTLESVGSVSLVAIKQKLSSRSLQVAVWTVVNSMGSYIPAINSIALDTIQSLLKSTAEKLQFVKHLKTRFLLQPSLVDITCAAKDFIIPEWEGESVHHTLYFVNQSRSCILVAEPPSYISIFDLIAIVVSQILGSPTVLPIGSLFVCPEGSEIAVVNVLKLCLDKKEVEPISVSSNLMGKEIMPQDARLVQFHPLRPFYSGEIVAWRSQNGEKLKYGKVPEDVRPSTGQALYRFKIETAPDVTQVLLSSQVFSFKSRAASSPISEILVDDSPVVSSNKPHVEVSESLGRGKSCSQPLREVQYGKVSAAELVQAVHEILSAAGINMDVEKQSLIQRTINLQETLKESQAALLLEQERVEVAAKEADTAKAAWLCRVCLTAEVDITIVPCGHVLCHKCCSAVSKCPFCRLQVTETIRIFHP 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g2054 674 Coils Coil 238 258 - -
Glsi09g2054 674 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 601 673 IPR013083 -
Glsi09g2054 674 Pfam Zinc finger, C3HC4 type (RING finger) 627 667 - -
Glsi09g2054 674 ProSiteProfiles Zinc finger RING-type profile. 628 662 IPR001841 -
Glsi09g2054 674 PANTHER SACSIN 63 661 - -
Glsi09g2054 674 SMART ring_2 628 661 IPR001841 -
Glsi09g2054 674 SUPERFAMILY RING/U-box 624 669 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g2054 584 672 C3H Transcription Factor Family AT1G73950 32.222 6.72e-08 53.5