Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi09g2035 | ATGGTAGGTAGAGGATCCGCGAAGTCAAATCCATCACAGGCTAGGAAGAGAGTAGATGCTATTGATTCTCAGGCTGGTTCCGTTCTTGTCCGTGCTAGAGATGGCAGTGCTTTTGCCAAATGTGACGAGTGCAGCAAGAATGTTCCTGTAGCGCTCATCAGTATGCACAGTTGCAGCCTTGAAGCTAAAATTAAAATGAATCTGGGGGCTCAGGTTGTGGAAAAGCCTGCTGAAGCCAAGAAGCCATCAGACAGGAAGAAGCCAAAATCTACAGAACCAAAGGCTAAAAGGGCCAAGGTGGAGAAGGGGATTAAGGGCAAGGATCCTAACAAACCCAAGCGGCCTCCTACAGCCTTTTTTGTCTTCTTGGATGAATTTAGGAAATCTTTTAAGGAAGCAAACCCTGATTCAAAGGATGTTAAAAGGGTTAGTAAAGAGGCGGGTGAGAAGTGGAAGTCTCTGTCTGATGAAGAGAAGCAGCCTTACTTGGATAAAGTTGCTGAACTTAAGGCAGAATATGAGAAGACCTTAGCAAGTTACAATGCTGCTGAAGATGAAGACGAAGATGTGCAAGAGGAGCCTGATAAGGAAGACGTAAGATGCAGCAAAGGAAGTGGAAGAGATCTCTGA | 630 | 0.454 | MVGRGSAKSNPSQARKRVDAIDSQAGSVLVRARDGSAFAKCDECSKNVPVALISMHSCSLEAKIKMNLGAQVVEKPAEAKKPSDRKKPKSTEPKAKRAKVEKGIKGKDPNKPKRPPTAFFVFLDEFRKSFKEANPDSKDVKRVSKEAGEKWKSLSDEEKQPYLDKVAELKAEYEKTLASYNAAEDEDEDVQEEPDKEDVRCSKGSGRDL | 209 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi09g2035 | 209 | Pfam | HMG (high mobility group) box | 112 | 181 | IPR009071 | - | |
Glsi09g2035 | 209 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Glsi09g2035 | 209 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Glsi09g2035 | 209 | Coils | Coil | 163 | 186 | - | - | |
Glsi09g2035 | 209 | SMART | hmgende2 | 111 | 182 | IPR009071 | - | |
Glsi09g2035 | 209 | MobiDBLite | consensus disorder prediction | 179 | 209 | - | - | |
Glsi09g2035 | 209 | MobiDBLite | consensus disorder prediction | 133 | 159 | - | - | |
Glsi09g2035 | 209 | CDD | HMG-box_AtHMGB1-like | 113 | 173 | - | - | |
Glsi09g2035 | 209 | SUPERFAMILY | HMG-box | 99 | 181 | IPR036910 | - | |
Glsi09g2035 | 209 | MobiDBLite | consensus disorder prediction | 77 | 112 | - | - | |
Glsi09g2035 | 209 | ProSiteProfiles | HMG boxes A and B DNA-binding domains profile. | 112 | 181 | IPR009071 | - | |
Glsi09g2035 | 209 | MobiDBLite | consensus disorder prediction | 195 | 209 | - | - | |
Glsi09g2035 | 209 | MobiDBLite | consensus disorder prediction | 74 | 116 | - | - | |
Glsi09g2035 | 209 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 12-RELATED | 13 | 198 | - | - | |
Glsi09g2035 | 209 | Gene3D | High mobility group box domain | 98 | 181 | IPR036910 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi09g2035 | Glsi-ChrGlsi09 | 35596675 | 35598373 | Transposed |