Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1995 ATGTCTGCAAATGTAGCAAGCACTATAACACGCCCACCCAAGCAAATACTAGAAATGCATATGTGGGGGCATGGATCTCAATACAGAAAAGGACCAGATTCTTTAAGAGGAACACAACCGACAGCCATGCTTAGGCTTCCATGCTTTTGTTGTGCACCAGGTTGCAAGCACAACATTGACCACCCAAGAGCAAGGCCTCTCAAGGATTTTAGAACCCTTCAAACACATTATAAGAGGAAGCATGGGATCAAACCCTATATGTGTAGAAAATGTGGCAAAGCATTTGCAGTGAAAGGTGATTGGAGAACTCATGAGAAGAATTATGGCAAAATATGGTATTGTCTTTGTGGGTTTGATTTCAAACACAAGAGATCTCTAAAAGACCACATTAAGGCATTTGGCTAG 405 0.4173 MSANVASTITRPPKQILEMHMWGHGSQYRKGPDSLRGTQPTAMLRLPCFCCAPGCKHNIDHPRARPLKDFRTLQTHYKRKHGIKPYMCRKCGKAFAVKGDWRTHEKNYGKIWYCLCGFDFKHKRSLKDHIKAFG 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1995 134 FunFam Zinc finger protein WIP2 55 134 - -
Glsi09g1995 134 SUPERFAMILY beta-beta-alpha zinc fingers 72 106 IPR036236 -
Glsi09g1995 134 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 108 IPR013087 -
Glsi09g1995 134 Gene3D Classic Zinc Finger 65 133 - -
Glsi09g1995 134 PANTHER ZINC FINGER PROTEIN WIP2 17 134 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1995 Glsi-ChrGlsi09 26773906 26776188 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1995 17 134 C2H2 Transcription Factor Family AT3G57670 88.136 3.21e-78 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Glsi09g1995 None None None