Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1994 ATGACCCGTGGGACCCTCCGTGAACATCTTTACGACTCTGATAACCAGCCACTTTTATGGAGGCAAAGGCTTGAAATATGCGTAGGAGCTGCAAGGGGGCTACTCTATCTTCATACCAGTACAGATGAGAACAAGCAGAGCGTGATCCACCGTGACGTGAAGAGTACAAACATTTTGTTAGACAAAGATTGGGTAGCAAAGGTTTCAGATTTCGGATTGTCCAAAATTGGACCCACTGGGTTGTCCAGGTCACACATTACCACAGACGTCAAAGGTAGCGTGGGGTATTTGGACCCAGAATACTACATGAGTCTAAGGTTGACCCAGAAATCTGACGTTTACTCTTTTGGTGTGGTGTTGCTTGAGGTTTTGTGTGGAAGGCCACCATTGCTTCGGAGGATGGAGAAGCAGGAGGGATGCCTAGTAGAGTGGGTTCGAAAATGCTATGATAAGAGGGAGATTGCTGAGGTGGTTGATCCAGTTTTGAAGAGGATTATCACGCCTCAATGTTTGAATAAGTTTGTTAAATTGGCATTGAGTTGCCTGCATGATAATGGGAAGCAACGGCCATTGATGAGAGACGTGGTGATGAGCCTAGAGTCTGCATTGCAGATGCAAGGGAGCAAGAAGGACGGGACACTGATAGAAGGAAATGCAAAGAGTGAGGACACAGCAACTTTGACCGGATTTAAAAGTGATGAAGAAAGTGGTGTGCAGTTCTCTACTTCAGATGGATCCATGACTGATTCCAAGAGCGGCAGCAATGTAACCATCGCAAGTAGTGAGGAAGAGCAAGCTTTGGTTCCTGCAGGGGTTTTCTCCGAACTTGCAAATCCAACGGCACGATAA 849 0.4653 MTRGTLREHLYDSDNQPLLWRQRLEICVGAARGLLYLHTSTDENKQSVIHRDVKSTNILLDKDWVAKVSDFGLSKIGPTGLSRSHITTDVKGSVGYLDPEYYMSLRLTQKSDVYSFGVVLLEVLCGRPPLLRRMEKQEGCLVEWVRKCYDKREIAEVVDPVLKRIITPQCLNKFVKLALSCLHDNGKQRPLMRDVVMSLESALQMQGSKKDGTLIEGNAKSEDTATLTGFKSDEESGVQFSTSDGSMTDSKSGSNVTIASSEEEQALVPAGVFSELANPTAR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1994 282 Gene3D Transferase(Phosphotransferase) domain 1 1 223 - -
Glsi09g1994 282 Pfam Protein tyrosine and serine/threonine kinase 1 199 IPR001245 GO:0004672|GO:0006468
Glsi09g1994 282 PANTHER OS07G0166700 PROTEIN 1 206 IPR045272 GO:0004714|GO:0006468
Glsi09g1994 282 ProSiteProfiles Protein kinase domain profile. 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1994 282 SUPERFAMILY Protein kinase-like (PK-like) 1 197 IPR011009 -
Glsi09g1994 282 SMART serkin_6 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1994 282 FunFam Receptor-like protein kinase FERONIA 1 221 - -
Glsi09g1994 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
Glsi09g1994 282 MobiDBLite consensus disorder prediction 226 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1994 Glsi-ChrGlsi09 26603907 26604755 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1994 1 282 Receptor kinase-like Gene Family AT3G51550 50.342 2.93e-87 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi09g1994 PK_Tyr_Ser-Thr 7.6e-28 CL0016