Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1966 ATGTCTTCGGCTTTAAAAATTGCTCCTTTGTTAGCGGTTCTGCTTCTTTCAAATTTGATTATGCCCTCTGACGCAGATGGCATTATTGTCGCACACAAAGCTCAAGTGAAGATCATCAATAACCTGGGTAAAAACCTGGACCTTACCCTCCATTGCAAATCAAAAGATGATGATCTTGGTGAAAAGTTCCTGCATTTTGGTGCTTCTTACCAATTCAGTTTCCGTCCAAACCTGAGAATGACAACCTTGTTTTATTGCAGCTTTAAATGGAAAGGTGCTTTTCACTGGTTTGATATTTACGTACAGAAAAGGGATCATGATAAATGTGAAGAGTGCATTTGGAGCATTAAACCAGCCCAACCTTGTATGCTTAATAATGTAACTGGTAAATATGATATTTGCTATTATTGGAATTGA 417 0.3765 MSSALKIAPLLAVLLLSNLIMPSDADGIIVAHKAQVKIINNLGKNLDLTLHCKSKDDDLGEKFLHFGASYQFSFRPNLRMTTLFYCSFKWKGAFHWFDIYVQKRDHDKCEECIWSIKPAQPCMLNNVTGKYDICYYWN 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1966 138 Pfam Plant self-incompatibility protein S1 35 137 IPR010264 -
Glsi09g1966 138 PANTHER - 30 126 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1966 Glsi-ChrGlsi09 24157986 24158402 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1966 20 138 Carbohydrate Esterase AT3G16970 40.650 7.89e-30 103