Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1960 ATGCTAGCAGTGAAGTGGGTGCTGAAGCTCCTGCTTCCGGCCGGATCAGCGATTCCCAGGGTTTTCTCTTGTAATTACTGTAGGTGGAAGTTCTTCGGCTCCCAGGCATTGGGGGGCCATCAAAATGCTCATAAAAGGGAGAGGACAATGGCGAAGCGAGCAAAGCGAATGGGGATGTTCACCGAAAGGTATACAAGCTTGGCATCTCTGCCCCTTCATGGTTCTGATTTCCGGTCTCTTGGTATTGAAGCTCATGATGCAATGCACCAAACACTTATGCCATCGCTGCAGGTTCCCCATCTAAGAGCCGGAGCAAAATTTGAGAAAGACTATATATTTTGGATCACCCATGTTCATGGAAGAAGATGA 369 0.4851 MLAVKWVLKLLLPAGSAIPRVFSCNYCRWKFFGSQALGGHQNAHKRERTMAKRAKRMGMFTERYTSLASLPLHGSDFRSLGIEAHDAMHQTLMPSLQVPHLRAGAKFEKDYIFWITHVHGRR 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1960 122 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 19 97 IPR044246 GO:0009788
Glsi09g1960 122 ProSitePatterns Zinc finger C2H2 type domain signature. 24 44 IPR013087 -
Glsi09g1960 122 SUPERFAMILY beta-beta-alpha zinc fingers 20 50 IPR036236 -
Glsi09g1960 122 Gene3D Classic Zinc Finger 18 70 - -
Glsi09g1960 122 ProSiteProfiles Zinc finger C2H2 type domain profile. 22 49 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1960 Glsi-ChrGlsi09 23962906 23963274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1960 20 111 C2H2 Transcription Factor Family AT1G66140 50.877 2.73e-26 97.1