Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1946 ATGTTACCTCATATCATTCCAGATGTTTACGGATCAAACGCAAAAGACCCCGCCAATGCTGAAATAGGGAGATCTCACTTTGCTCATGCCCACCATCCCTTTCCCATCTTTTCTCTTGTTTCTTCTCCTTCTTCTTTCCAAATTTTCCTCTTTCAATTTCTCAATCTCACCAGGTGCATCAAGACCAAGCAGTACCAATATTTAATTCAGATGTATGGGAGAAAAGCATGCCAGCTAGTCAAAGAACTTGCAAGCGGGGAAAAGGGTCAGCTCACGGCATTCAATAGTGATCTATTCGAACAAGTAGTTGCAGAATGCAGTCAACATCATCTTGAGCTTCAGTCGTTGATTAGAAAGATTCAAGAAGAAGGATTGGATGTTCAAACAACTAGAAATTCGGACCACCATGGTGCACTTATCCACCATCTTTCTTTAGTTCGAAATAAACGTTGCCTCATGGCCTATGTGTATAATCGAGCTGAGATTATACAGAGTTTGGTATGGAAGATAGGACATGTGCTTCCTCAAGAAATTGAGGAGAAGCTTTGTCATTCGGAGGTAGAGTATTTTAAGAAGCATTCTGCGGCTTTGAAATCATATATGTCAAGAGTGCAACTTGATCTGACTGTGGATATGGTGCCGCCCAAAGATCCCTACATTCAAGTGAGGGTTCTCGATGATATTGGCGAAGGAATTGTGCTTAGTGATGATAAGACTGCCAATTTTGCCCGCCATTCAATGCACTTTCTGAAGAGAACCGACGCGGAGCAATTTATTTCACGGGGCTTAATGGAGGAGCTCACAGGTTGA 810 0.4235 MLPHIIPDVYGSNAKDPANAEIGRSHFAHAHHPFPIFSLVSSPSSFQIFLFQFLNLTRCIKTKQYQYLIQMYGRKACQLVKELASGEKGQLTAFNSDLFEQVVAECSQHHLELQSLIRKIQEEGLDVQTTRNSDHHGALIHHLSLVRNKRCLMAYVYNRAEIIQSLVWKIGHVLPQEIEEKLCHSEVEYFKKHSAALKSYMSRVQLDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFARHSMHFLKRTDAEQFISRGLMEELTG 269
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1946 269 Pfam GINS complex protein 114 186 IPR021151 -
Glsi09g1946 269 PANTHER PARTNER OF SLD5 71 268 IPR005339 GO:0000811|GO:0006260
Glsi09g1946 269 CDD GINS_A_psf1 73 202 IPR005339 GO:0000811|GO:0006260
Glsi09g1946 269 SUPERFAMILY GINS helical bundle-like 71 216 IPR036224 -
Glsi09g1946 269 CDD GINS_B_Psf1 218 267 - -
Glsi09g1946 269 FunFam DNA replication complex GINS protein PSF1 71 204 - -
Glsi09g1946 269 Gene3D - 71 204 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi09g1946 Glsi-ChrGlsi09 23488771 23492848 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1946 71 269 Core DNA Replication Machinery Family AT1G80190 69.802 1.78e-103 298