Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1939 ATGGCTCTTATCTTAATCTTCTTCCTCTCCTTCACCTTCCTCTTACTCCGCCACCCTCAATTCTCAATTGCTCAACAGCAGAAACCCGTCAACCTCTCATCCTTCACCATCTCAGACTCCCCATGGCTACCAAACCAGAACCGTACCCTTCACTCTCCCAATTCCAATTTCTCTGCTGGGTTCTTACCCATACCCACTTCGCCAAATCTCTACACCTTCTCCGTTTGGTTCACTAATGTACCCAGAAATCATGTCGTCTGGTCTGCCAATCCCAACTCTTCGGTCAACCGCTCTGCTTCTCTCGTTATCACCTCCAAAGGCGAGCTTCTTCTCAATGGTTCCCCCTTCGGAAATGCTTCTGCTGCTTCCAATTCCACAGAACAGCTCGTTCTCGACAACGATGGCAATTTGGTTTTCGGGAATTGGAACAGCTTTGCCAATCCAACGAATACGATTCTCCCCAACCAAAACATCACGGGAATTGAGCTTCAGTCCAACAGTGGGATTTACAAGTTCGTCAATTCCACGAACTTGGTTCTCAAGTCCTCCTCTGCTATATACTATAACACCCCAAGTGCGTTGGTGAGCATGGATGGGGCTGGGAAAATGACCATGCAAAGTAGCTCTTTCCTTACCAATGATTACGGCGACAATCGGCCCCGGAAAATTGTTCTTGACGATGATGGAAATCTCAGAATCTATAGCTTCTACCCAGAGCAGCAAAACCAGTGGAATGTAGTTTGGATTGCAATATGGGAACTCTGCACAATCAAAGGCAAATGTGGGCCTAATGCTATCTGCTTGCCTGATAACGGCACAAATGACTCTTTATCCTGTGTTTGTCCAGCAGGGTTCAAGCCAAATCAAGGTGGACCTCAAAATGGTTGCTCAAGGAAAACCAAACTTACCAATAACACCAAGTTTCTGAAGCTGGATTATGTAAACTACACTAGCAAGCCGAACCAGATGGTGAGCATCTTTGCTAGAAATTTCACAACCTGTCAATCTAAATGCAATTCAAACTTAACGTGTCTTGCGTTTGGCTTCAAATATGATGGATCTGGTTATTGTTCTTTGGTACTAAAAGATCTCCTATATGGGTATTGGTCTCCTGGCACAGAAACTGCCCTGTTTCTTAAGGTTGACAAATCCGAATCCGAAACCCCCAATTTCAGTGGCATGACCCAAGTTTTCCAGACGTCGTGCCCTGTTAAGATCAGCCTGCCAGAACCACCCAAAGATTCGAACAGCACGACCCGAGACATCCTCATAATCTGTACCCTTTTCGCTGCAGAGCTCATTTCTGGGGTGGCCTTCTTCTGGTCTTTTCTCAAGAGGTATATCAAGTACAGGGACATGGCTACCACTCTTGGCCTTGAGCTTCTTCCAGCCGGGGGCCCAAAACGGTACACATATTCCGAGCTCAAAGCCGCCACGAAGGACTTCTCTAATCTCATTGGAAGAGGTGGGTTTGGCGATGTTTACAGAGGGGAGCTGCCGGACCACCGCATCGTCGCCGTCAAGTGCCTGAAGAATGTCACCGGCGGCGATGCCGAGTTCTGGGCAGAGGTCACTATCATTGCCAGAATGCACCACCTCAACTTGGTACGCCTGTGGGGCTTTTGTGCTGAGAAAGGTCAACGAATACTCGTCTATGAGTATATCCCCGGTGGGTCATTGGATAGGTACCTATTTCGTACACGTCGGGTCGGATCTAAGGAAGATACTTCTCCGAATTCGGATCCAAACCCTGACCTGAATACAGAACAAAAACCCATTCTCGACTGGAATATCCGGTACAGGATTGCTCTGGGAGTGGCAAGATCCATAGCATACTTGCACGAGGAGTGTTTGGAATGGGTTTTGCACTGCGATATCAAGCCAGAGAACATACTACTAGGCGACGATTTTTGCCCAAAGATATCGGATTTCGGGTTGGCAAAGCTCCGGAAGAAAGAGGATTTGGTAACCATGTCCAGAAGGAGAGGGACTCCGGGTTATATGGCTCCGGAATGGATCACAGCGGATCCAATCACTCCCAAAGCTGATGTGTACAGCTTTGGGATGGTTTTGTTAGAGCTTGTGAGTGGGTTTAGGAACTTCGAGATTCCAGGGTCCTTCTTGCATAGTGAGGAATGGTATTTTCCAGGGTGGGCATTTGATAAGATGTTTAAAGATATGAAAGTGGAGGACATTCTGGACTACCAGATCAGGCACTTTTATGATAGTAGGGCCCATTTTGATATGATTAATAGGATGGTGAAGACAGCAATGTGGTGTCTTCAGGATAGGCCTGAGATGAGGCCTACAATGGGTAAAGTGGCAAAGATGTTGGAAGGGACAGCGGAGATTACTGAACCTAAGAAGCCCACTGTGTTCTTCCTTGGAGAGTAA 2394 0.472 MALILIFFLSFTFLLLRHPQFSIAQQQKPVNLSSFTISDSPWLPNQNRTLHSPNSNFSAGFLPIPTSPNLYTFSVWFTNVPRNHVVWSANPNSSVNRSASLVITSKGELLLNGSPFGNASAASNSTEQLVLDNDGNLVFGNWNSFANPTNTILPNQNITGIELQSNSGIYKFVNSTNLVLKSSSAIYYNTPSALVSMDGAGKMTMQSSSFLTNDYGDNRPRKIVLDDDGNLRIYSFYPEQQNQWNVVWIAIWELCTIKGKCGPNAICLPDNGTNDSLSCVCPAGFKPNQGGPQNGCSRKTKLTNNTKFLKLDYVNYTSKPNQMVSIFARNFTTCQSKCNSNLTCLAFGFKYDGSGYCSLVLKDLLYGYWSPGTETALFLKVDKSESETPNFSGMTQVFQTSCPVKISLPEPPKDSNSTTRDILIICTLFAAELISGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRYTYSELKAATKDFSNLIGRGGFGDVYRGELPDHRIVAVKCLKNVTGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILVYEYIPGGSLDRYLFRTRRVGSKEDTSPNSDPNPDLNTEQKPILDWNIRYRIALGVARSIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDLVTMSRRRGTPGYMAPEWITADPITPKADVYSFGMVLLELVSGFRNFEIPGSFLHSEEWYFPGWAFDKMFKDMKVEDILDYQIRHFYDSRAHFDMINRMVKTAMWCLQDRPEMRPTMGKVAKMLEGTAEITEPKKPTVFFLGE 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1939 797 SMART serkin_6 480 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1939 797 PANTHER OS07G0415500 PROTEIN 7 793 - -
Glsi09g1939 797 FunFam S-receptor-like serine/threonine-protein kinase 452 554 - -
Glsi09g1939 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 191 IPR036426 -
Glsi09g1939 797 PIRSF SRK 1 797 IPR024171 GO:0004674
Glsi09g1939 797 SMART blect_4 45 148 IPR001480 -
Glsi09g1939 797 Pfam Protein kinase domain 484 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1939 797 FunFam Serine/threonine-protein kinase 555 789 - -
Glsi09g1939 797 ProSitePatterns Protein kinases ATP-binding region signature. 486 508 IPR017441 GO:0005524
Glsi09g1939 797 Gene3D Phosphorylase Kinase; domain 1 455 554 - -
Glsi09g1939 797 Gene3D - 35 153 IPR036426 -
Glsi09g1939 797 ProSiteProfiles Bulb-type lectin domain profile. 35 185 IPR001480 -
Glsi09g1939 797 CDD STKc_IRAK 486 780 - -
Glsi09g1939 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Glsi09g1939 797 Gene3D Transferase(Phosphotransferase) domain 1 557 791 - -
Glsi09g1939 797 ProSiteProfiles PAN/Apple domain profile. 296 382 IPR003609 -
Glsi09g1939 797 SUPERFAMILY Protein kinase-like (PK-like) 462 779 IPR011009 -
Glsi09g1939 797 ProSiteProfiles Protein kinase domain profile. 480 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1939 797 Pfam S-locus glycoprotein domain 206 288 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1939 Glsi-ChrGlsi09 23341194 23343587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1939 320 790 Receptor kinase-like Gene Family AT4G18250 32.515 2.82e-75 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Glsi09g1939 Pkinase 2.4e-44 CL0016