Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1908 ATGAAGTTCAACATTGCCAATCCCACCACTGGGTGCCAGAAGAAGCTTGAAATTGATGATGATGCTAAACTGCGAGCATTTTGGGACAAGAGGATATCACAAGAAGTCAGTGGAGATGCACTGGGGGAGGAGTTTAAGGGCTATGTGTTCAAAATAACTGGAGGCTGTGACAAACAGGGTTTCCCAATGAAGCAGGGAGTGCTGACTCCTGGACGTGTTCGATTATTGCTGCACAGAGGAACTCCTTGCTTTCGTGGTTATGGAAGAAGGAATGGAGAGAGGAGGAGGAAGTCTGTTCGTGGCTGCATAGTCAGTCCAGACCTCTCTGTCCTTAACTTGGTTATTGTGAAGAAAGGTGAGAATGATCTTCCTGGATTGACTGACATCGAGAAGCCAAGAATGAGAGGACCAAAACGGGCTTCAAAGATTAGGAAATTGTTTAATCTCTCCAAGGAGGATGATGTGCGCAAATATGTCAATACATATCGTAGAACCTTTACAAATAAGGCTGGCAAGAAGGTCAGCAAAGCTCCCAAAATTCAGAGGTTGGTTACTCCCTTGACTTTGCAAAGGAAGCGAGCAAGGATTGCAGACAAGAAGAAGAGAATTGCCAAGACCAAGTCTGAAGCTGCTGAATATCAAAAGCTCCTTGCCAGCCGGTTGAAGGAGCAACGTGAACGCCGTAGTGAGAGCTTGGCTAAGAGGAGATCTAGGCTCTCTGCTGCATCTAAGCCTTCAGCCACTGCATAG 750 0.464 MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVSGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKTKSEAAEYQKLLASRLKEQRERRSESLAKRRSRLSAASKPSATA 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1908 249 Coils Coil 189 216 - -
Glsi09g1908 249 Gene3D - 133 234 - -
Glsi09g1908 249 PANTHER 40S RIBOSOMAL PROTEIN S6 1 240 IPR001377 GO:0003735|GO:0005840|GO:0006412
Glsi09g1908 249 MobiDBLite consensus disorder prediction 221 249 - -
Glsi09g1908 249 PIRSF RPS6e 1 249 IPR014401 GO:0003735|GO:0005840|GO:0006412
Glsi09g1908 249 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Glsi09g1908 249 MobiDBLite consensus disorder prediction 221 237 - -
Glsi09g1908 249 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Glsi09g1908 249 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1908 Glsi-ChrGlsi09 21414801 21417051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1908 1 248 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 71.888 2.14e-119 337