Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1907 ATGGCGGGACGGACTCTTTTTCAAGAGGAAAAGAAGAGTACAGATTGGCTCAGTACTCTTTTGCATAGCAGTTTTGGCCATTGTGATGATCATCAAGAATTTCGGTACAATGAGAAGAATGTTTTCTGTATAGACTGTCAACTTAGCTTATGCAGGCATTGCAAGGTAGCTCATACCCTCCATAGAAGGTTTCAGATATACAAATATGTTTATCAAGATGTTGTTCGACATTCAGAACTGCAGAAGTATTTTGACTGCTCAAAAATTCAGACTTACATATCCAATAATGAAAAGATCATACATCTCAATCCTCGGCCTTCGTCAAAAAGTACCAAACCAACAAAAAGAGATAAATGTGTTGATCTAAGCCCTGAGTCTCTATCCAAAGATACCAAAGTGACCAGATCAAAGTCAGGTGGTACCTGTGAAGAATGCGGCAAACATTTACAAGATGAGCGTAATTGCTTCTGTTCCATTGCATGCAAGATCTCAGTGCTGATCAAAACTCCAAAACCAGAAGTTTCTGACAATTCTTTGAATGATAATCAGAATTCCGAAACTGAGTCATCGATCACTGAGGCAGAGCCATATGAATGGGTTGAGGTGGTGAATTTAAGAAAGCGCCCAAGAAAAGCCATCCCTCATAGATCCCCTTTTGTCTTAATATCTTAA 672 0.3914 MAGRTLFQEEKKSTDWLSTLLHSSFGHCDDHQEFRYNEKNVFCIDCQLSLCRHCKVAHTLHRRFQIYKYVYQDVVRHSELQKYFDCSKIQTYISNNEKIIHLNPRPSSKSTKPTKRDKCVDLSPESLSKDTKVTRSKSGGTCEECGKHLQDERNCFCSIACKISVLIKTPKPEVSDNSLNDNQNSETESSITEAEPYEWVEVVNLRKRPRKAIPHRSPFVLIS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1907 223 MobiDBLite consensus disorder prediction 172 192 - -
Glsi09g1907 223 Pfam PLATZ transcription factor 68 163 IPR006734 -
Glsi09g1907 223 ProSiteProfiles Zinc finger B-box type profile. 23 66 IPR000315 GO:0008270
Glsi09g1907 223 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 219 - -
Glsi09g1907 223 MobiDBLite consensus disorder prediction 102 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1907 Glsi-ChrGlsi09 21403886 21405903 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Glsi09g1907 PLATZ 1.2e-25 No_clan