Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1887 ATGGAAGCTACCATTAATGGTGAAAATGGAGGGAGAAGTGATGCAGAGAAAGAAGTTGATGAGGAGGAGCTTCATCTAAAGAAGATGATTGCAAGCCATCCTTTGTATGGACTTTTGATTGAGTCTCACTTCAACTGTTTGAAGGTGGGATTAGATGAATTTGCAGAGTTTGATGTGCCAAATGATGCATGGAAGCAGCTGGCTAATTCCAAGAGAAAAGCGACCACTGCTCCTCCCAACTCTTCAGAGCTTGATCAATTCATGGAAGCATATTGCATGGCACTGAGCAAGCTCAAAGAAGCCATAGAGGAACCAACAAGAGAAACAAAGGCTTTTATCAATGCCACCTATATAGAACTGAAAGATCTCAATATTGAACCAAATGACCCACAAGAGTCTCTCATGTGGACCAAGAATCTCGATGATGATTCATCTCATTAG 441 0.415 MEATINGENGGRSDAEKEVDEEELHLKKMIASHPLYGLLIESHFNCLKVGLDEFAEFDVPNDAWKQLANSKRKATTAPPNSSELDQFMEAYCMALSKLKEAIEEPTRETKAFINATYIELKDLNIEPNDPQESLMWTKNLDDDSSH 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1887 146 Pfam KNOX2 domain 82 123 IPR005541 GO:0003677|GO:0005634
Glsi09g1887 146 MobiDBLite consensus disorder prediction 1 20 - -
Glsi09g1887 146 SMART KNOX2_2 74 125 IPR005541 GO:0003677|GO:0005634
Glsi09g1887 146 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 9 126 - -
Glsi09g1887 146 SMART KNOX1_2 24 63 IPR005540 GO:0003677|GO:0005634
Glsi09g1887 146 Coils Coil 12 32 - -
Glsi09g1887 146 Pfam KNOX1 domain 26 50 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1887 Glsi-ChrGlsi09 20913987 20915301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1887 26 127 Homeobox Transcription Factor Family AT4G08150 31.776 2.11e-10 55.8