Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1833 ATGTTCTGGCCATTGTTATTCCCCCATGAAGACTTGGCGGAGAAGATTGGTACATTGGTGAAAGCGGCTAATGTGTCTGTTGAATCGTACTGGCCAATCCTATTTGCGAAGCTTGCAGACAAGGGGAACATTGAGGATCTAATTTTGAATGTTGGTGCAGGCGGCGCTCCCACTGTAGCAATGGCTGCTCCTGCTTGTGGTGCCATAGCTAACACAGCGCCTGCTGCCAAGGAAAAGAAGTATGAAGAAATGCGGATAATGCATTTCAAGAGAAACTTGAAACTGAACACTCGAGGCCCAGTTGAAGGCTTGGTTGGTGAATATTTCCCGGAAGAACCAAAGGAAGAGAGTGATGATGACATTGGGTTCAGCTTGTTTGATTAG 384 0.4661 MFWPLLFPHEDLAEKIGTLVKAANVSVESYWPILFAKLADKGNIEDLILNVGAGGAPTVAMAAPACGAIANTAPAAKEKKYEEMRIMHFKRNLKLNTRGPVEGLVGEYFPEEPKEESDDDIGFSLFD 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1833 127 Gene3D - 8 52 IPR038716 -
Glsi09g1833 127 FunFam 60S acidic ribosomal protein P2 12 52 - -
Glsi09g1833 127 Pfam 60s Acidic ribosomal protein 13 83 - -
Glsi09g1833 127 MobiDBLite consensus disorder prediction 107 127 - -
Glsi09g1833 127 CDD Ribosomal_P1 13 126 - -
Glsi09g1833 127 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 13 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1833 Glsi-ChrGlsi09 18887777 18889415 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1833 3 127 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 40.909 2.27e-20 78.2