Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1827 ATGCATCCCACAGTGATGGGTGGTGGGAGGGAAAAATACTTGAAACACTTAACAGTAGTGTCTTGTTCATTTCATGCCTACAATGAGAAGTCAAATGAGCTGGCAAATATCTCCAGGAAAGTAATGACAAAAACCAAAGGTACTGGAAATAAATTGATCATGAAATACCAGAAGTTTAGTGAGCTGGCAAAGAAGTCCGAAGATGTATTGTTGAAAACCATGGGCACTGGAAATAAATTTGTGCCACGTTTCTGTGAAGGTGGAAAGGTAGAAGTCAGAAGTGATGAAGAAGGTTACGAAGGTGCCTGGTATACTGCCATTGTTGTTGGAATTATGAAAAATGGAAAGTACTTGGTGGAGTATCAGACCCTGAAAACAGAAGACTTAACTGAAAATCTGAGAGAAGAAGCAGATGTTTTGGATATCAGGCCACTTCCACCAGATATCAATCATATTCACCTTTTTTCAAGGCGTGAAAGGGTTGATGTTTGGTATAATGATGGATGGTGGGTTGGCGAGGTATCCGATGTTATTCATGACTTCGAGTATAAGGTTTACTTTCAGACCACTAAAGAGGAGATGGTATTTACACAGTGTAATCTGAGGCCTCATCAAGAATGGATTAATGGAAAATGGGTTGTTGCTTCTTGGGGTTGA 657 0.4003 MHPTVMGGGREKYLKHLTVVSCSFHAYNEKSNELANISRKVMTKTKGTGNKLIMKYQKFSELAKKSEDVLLKTMGTGNKFVPRFCEGGKVEVRSDEEGYEGAWYTAIVVGIMKNGKYLVEYQTLKTEDLTENLREEADVLDIRPLPPDINHIHLFSRRERVDVWYNDGWWVGEVSDVIHDFEYKVYFQTTKEEMVFTQCNLRPHQEWINGKWVVASWG 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1827 218 Gene3D - 74 151 - -
Glsi09g1827 218 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 64 216 - -
Glsi09g1827 218 CDD Tudor_Agenet_AtDUF_rpt2_4 159 203 - -
Glsi09g1827 218 Pfam Agenet domain 87 147 IPR008395 -
Glsi09g1827 218 CDD Tudor_Agenet_AtDUF_rpt1_3 84 147 - -
Glsi09g1827 218 SMART agenet_At_2 153 209 IPR014002 -
Glsi09g1827 218 SMART agenet_At_2 82 150 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1827 Glsi-ChrGlsi09 18709875 18713226 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1827 93 207 PHD Transcription Factor Family AT5G58610 29.630 7.73e-10 56.2