Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1814 ATGAGAAACCAACCCCTTCATCTCCTCCTATTTGCAGCCACATTCTTCCTCCTCCACCCAACCAACACCGCCGGCGAAGACTACGCCACCGCTCCCTCCCCCGACGAGCCCAACGGCACCGAATTCATCCGCACAAGCTGCGGCACCACTCTCTACCCGGACATCTGCTACTCCTCCCTCTCTCGCTACGCCAATGCCGTCCAGCAGAACCCCGGCCAGCTCGCTCGCGTCGCCATAGCCGTGAGCCTCTCCAAGGCCCACCGAATGGCCTCCTACGTCGCCAACCTCACTCGCCAAGCCGACTACGGCACCAACTCCCGCGCCGCCTCCGCCCTCCACGACTGTTTCTCCAACATCGGCGACGCCGTCGACGAAATCCGAGGCTCGCTCAAGCAGATGCGCCAGATAGGAGCCGCCGGCGCCGGCGAAGAGTCGTTCCGGTTCCAGATGAGCAACGTGCAGACGTGGATGAGCGCGGCGCTCACGGACGAGGAGACATGTACGGACGGATTCGAGGACGTACCGGACAGTCCCGTGAAGACGGATGTATGCGACCGGGTCACCAACGTGAAGAAGTTCACGAGCAATGCCTTGGCCCTGGCAAATGGTTACGCTAATAAGGGAACGCCCTGA 633 0.6209 MRNQPLHLLLFAATFFLLHPTNTAGEDYATAPSPDEPNGTEFIRTSCGTTLYPDICYSSLSRYANAVQQNPGQLARVAIAVSLSKAHRMASYVANLTRQADYGTNSRAASALHDCFSNIGDAVDEIRGSLKQMRQIGAAGAGEESFRFQMSNVQTWMSAALTDEETCTDGFEDVPDSPVKTDVCDRVTNVKKFTSNALALANGYANKGTP 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1814 210 NCBIfam pectinesterase inhibitor domain 8 204 IPR006501 GO:0004857
Glsi09g1814 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 204 IPR035513 -
Glsi09g1814 210 Pfam Plant invertase/pectin methylesterase inhibitor 42 200 IPR006501 GO:0004857
Glsi09g1814 210 CDD PMEI-like_3 45 206 - -
Glsi09g1814 210 FunFam Pectin methylesterase inhibitor 1 38 204 - -
Glsi09g1814 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 202 IPR035513 -
Glsi09g1814 210 SMART PMEI_2 38 200 IPR006501 GO:0004857
Glsi09g1814 210 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1814 Glsi-ChrGlsi09 18405024 18405656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1814 23 200 Carbohydrate Esterase AT3G14310 24.581 5.01e-15 71.2