Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1796 ATGGAGGCGCAGGATAGAATTTTAGTTGAACTGGAGGAAGCCATCGACTTCGTTAACAAGGTTCACCTAAGGTTTCAACACAGGAGGCAACAATACAAGCTATTTCTTGATGTTCTTCTCAAGTTCCAGAGGGGGCGGAATCTGGTCCACCACTCGCTTGCTTCCCTCTTCGATGGCCATCCAGATTTGCAACGCACCTTTCAACACTTCCTTTCTCATTCTAAACCATCGCCGCTTTCTGAAACTGTTTCCACCGAGCATCGAGACGCCTTGAAGCGTTTAGAAACCCTAGCTCATGGGTTTCTTCTGAAAGTAAGCCGAGTATTAGATCGTGTATATTTCGTATCCTTCATGGACCACATTTATCAATGTCGGGTTCAAGAGTTAGATAGGGATGTTTCAAGAACGGTGATTGCTGAATATATTGGCGACTTTCCTGGCCTGATGGAAGAATATGAGAATTTTTGGGAAGTATCTGCCAAAGTGAAAGCCTCTCTTTCTACAGTTACAAACAAGCGTAAAAGGTCTTCATCCGCTGACCAACCTTGCCTCAAGAGACGCTCCTCTACTGATTCATCATATATTGATTGTTGA 594 0.4411 MEAQDRILVELEEAIDFVNKVHLRFQHRRQQYKLFLDVLLKFQRGRNLVHHSLASLFDGHPDLQRTFQHFLSHSKPSPLSETVSTEHRDALKRLETLAHGFLLKVSRVLDRVYFVSFMDHIYQCRVQELDRDVSRTVIAEYIGDFPGLMEEYENFWEVSAKVKASLSTVTNKRKRSSSADQPCLKRRSSTDSSYIDC 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1796 197 MobiDBLite consensus disorder prediction 177 197 - -
Glsi09g1796 197 Gene3D Paired amphipathic helix 8 75 IPR036600 GO:0006355
Glsi09g1796 197 ProSiteProfiles PAH domain profile. 7 74 IPR003822 GO:0006355
Glsi09g1796 197 PANTHER SIN3B-RELATED 9 178 IPR039774 GO:0003714
Glsi09g1796 197 Pfam Paired amphipathic helix repeat 31 71 IPR003822 GO:0006355
Glsi09g1796 197 SUPERFAMILY PAH2 domain 9 73 IPR036600 GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi09g1796 PAH 3.8e-06 No_clan