Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1778 ATGGCTCCAGAATTATCCACTGACAGTATTGCAACACAGAAGATAGACGTATATAGCTTTGGTGTTGTGATCTTGGACATCATCCACGGCACAAGAGTCACTGAATATTACTCGAAAATGACGGATGAGGCATACGGACTTCACCAAGAAGGTAGGAGCTTAGAATTCATGGATCGTATCTTAGAAGCTTCCGCTGTAGCTGAGGAAGTGGACAAATGCATTGCAATAGGCTTGCTGTGCGTTCAGGGTGATCCAGAATTACGTCCTGACATGAAAGATGTGGTGTTTATGTTAGAGAATCAGGGCCACGGGAAAAGGACAATTGGCAAACCAGGATTACGTGGCTATCATGATTTCTTTATCAATAATCTCATTAATCAAGGTTCTCGGACCTCATATGGTGTATCTGCCTATCTGGGTCAGAATGCCGAAAGCGTTCTAGGAGTTTTTGTGTAA 456 0.432 MAPELSTDSIATQKIDVYSFGVVILDIIHGTRVTEYYSKMTDEAYGLHQEGRSLEFMDRILEASAVAEEVDKCIAIGLLCVQGDPELRPDMKDVVFMLENQGHGKRTIGKPGLRGYHDFFINNLINQGSRTSYGVSAYLGQNAESVLGVFV 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1778 151 Gene3D Transferase(Phosphotransferase) domain 1 1 109 - -
Glsi09g1778 151 Pfam Protein tyrosine and serine/threonine kinase 1 96 IPR001245 GO:0004672|GO:0006468
Glsi09g1778 151 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1778 151 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 111 - -
Glsi09g1778 151 SUPERFAMILY Protein kinase-like (PK-like) 1 99 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1778 Glsi-ChrGlsi09 17488482 17489738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1778 1 101 Receptor kinase-like Gene Family AT1G53430 42.453 3.03e-18 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi09g1778 PK_Tyr_Ser-Thr 4.8e-07 CL0016