Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1773 ATGGTTCAAGTCTGGTTGATGAGTCAATCTAATTTTGCAGCTTCTGAGAAAGTCATAATTGAGTCAAAAATTACTGATCAAAGCGAAGGTATTCTTCTAAATTCAAGTCAACTCATGCAAGGAGACCCATCAACTAGCTTATTCTCATCTCATGTCCAGGATGATAATGATGAGGAAGGAAAAGTTCCTGATACAATCTCTTCAGGGGTGAAGGAGCCTCTGGATGCGTCTACAAGCGGATATATGGCTCCAGAGTTTGCATTCGGTCCAATTATTGGAACACAAAAGATGGACTTATATAGTCTTGGTGTTACGATCTTGGAGATCATCAGTGGCAAAAAAAATTGTGTTTTGGAGCTTGATTACGCGCTTGATGAGGATATTCTTATAAATAAGGCATACAAACTTTACCAACAAGGCAGGAGCTTAGAATTCATGGATCATACCTTAAAAGCTTCGGCAGTAACTGAAGAAGTGGAAAAATGCATTGCAATAGGCTTGCTATGCGCTCAAAATGATCCAAAGTCACGTCCCGACATGAAGGAAGTTGTGTTTATGTTAGAGAATGAGGGCCATGTAGAAGGGCCAATTGACACTTCAAGATCCCATCATTATATTGCTTCCACATGGCTCGAAGATGCCAATGATCAAGGTTTTCTTTCCTCTCTTGAAACATCTACATAA 684 0.3977 MVQVWLMSQSNFAASEKVIIESKITDQSEGILLNSSQLMQGDPSTSLFSSHVQDDNDEEGKVPDTISSGVKEPLDASTSGYMAPEFAFGPIIGTQKMDLYSLGVTILEIISGKKNCVLELDYALDEDILINKAYKLYQQGRSLEFMDHTLKASAVTEEVEKCIAIGLLCAQNDPKSRPDMKEVVFMLENEGHVEGPIDTSRSHHYIASTWLEDANDQGFLSSLETST 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1773 227 MobiDBLite consensus disorder prediction 43 69 - -
Glsi09g1773 227 Pfam Protein tyrosine and serine/threonine kinase 80 185 IPR001245 GO:0004672|GO:0006468
Glsi09g1773 227 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1773 227 Gene3D Transferase(Phosphotransferase) domain 1 29 202 - -
Glsi09g1773 227 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 76 199 - -
Glsi09g1773 227 SUPERFAMILY Protein kinase-like (PK-like) 77 190 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1773 Glsi-ChrGlsi09 17264922 17270056 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1773 76 187 Receptor kinase-like Gene Family AT4G11530 42.105 7.03e-21 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi09g1773 PK_Tyr_Ser-Thr 1.2e-05 CL0016