Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1771 ATGAGATACCACAATGTTAAGATGATGATTCCAATGGCAAACGACAGCTTGATTGGCCACGGAGCTTATGATGATGCATCCAGTGGATATATTGCTCCAGAGTTGTGTTTCAATCCAAATGCCACACCAAAGGCAGATGTATATAGTCTTGGTGTTACGATCTTGGAGATTATTAGTGGCCAAAGAATCTCAAAGTCTTACTCAACGAATGGTTCAGATCTAGTTGATAAGGCGTATGATTTTTACCTTAAAAGATTAGAATTCATGGACCATACTTTAGAAGCTTCGGCAATAATTGGGGAAGTGAAAAAATGCACTGCAATAGGCTTGCTATGCACACAAGCTTCTGAGGAAGTCACAATAGAGTCAGAAATAACTGATCAAAGCGAAGGTACTCTTCTGAATTCAAGTCAACCCATGCAAGGAGACCCATCAACTAGCTCATTCTCATCTCATGTCCAAGCTGATAATGAGGGACATGAAGAGTTTAAGAAAATAGATGCCCAGCTGCTTAAGCAGTTTTCCTATAAAACCTTACTTGATGCTACTGTTGGGTTTTCTGATAATCATAAGCTAGGTGAAGGCCGCTTCGGATGCGTCTACAAGGGAGAGTTAAAAGATGGGAGAAAGGTTGCAGTGAAGGTGTTATCGATGTCGTCTGCTGAAGGAAGGGAAGTGTTCGAAAATGAGGCAATGATGATGATTAGCTTGCAGCACCGCAATTTGGTGAAGTTGTTTGGTTATTGCGCTCATAAAAATAAAAGGTTACTTGTGTACGAATTTGTTTCCGGTGGAAGTCTTGACCAGCTTCTCTTCGGTAAGGATTCCAATGGAAAACAACAGCTTGATTGGCCACGGAGACATGGCATAATTCAAGACATAGCATGGGGCTTGCGTTATTTTCACCAACACTCTCCCAAAAGCATCATCCATGGCGATATTAAACCGTACAATATATTAATTGATAAGCAGTGGAAACCCATTATAACAGCTTTTTGGACTAGCCATACCTTGCAGCCAAATGAAACTGAAGTCAGAGTAGATGGCCTGAGTGGGACCTGGGGATATATTGCTCCAGAGTTAGTTTACTCTTCAACTATTGCAACACAAAAGAGAGACGTATATAGTCTTGGTGTTACGATCTTGGAGATCATCAGTAGCAAAAGAGTCAATAAATTTGAAGGCTTTGCCAAGAACATGATGGATGAGGCATACGAACTTTACCAAGAAGGCAGGAGCTTAGAATTCATGGATCGTACCTTAAAAGCTTCAGCAGTAGCTGAGGAAGTAGACAAATGCATTGCAATAGGCTTGCTATGCGCTCAGGGTGATCCAGAGTTACGTCCCAACATGAAGGATGTTGTGTTTATGTTAGAGAATCAAGGCGATGTTGAAAGGACAATTGGCAGACCAGGACTCAGTGGTTATGATGATCGACTTTGCGTTAATCCCATTAATCCAGATTCTCCGATCTTTATAGATTCAGACGATGACATTGTACTTCCCAGGTAA 1512 0.4134 MRYHNVKMMIPMANDSLIGHGAYDDASSGYIAPELCFNPNATPKADVYSLGVTILEIISGQRISKSYSTNGSDLVDKAYDFYLKRLEFMDHTLEASAIIGEVKKCTAIGLLCTQASEEVTIESEITDQSEGTLLNSSQPMQGDPSTSSFSSHVQADNEGHEEFKKIDAQLLKQFSYKTLLDATVGFSDNHKLGEGRFGCVYKGELKDGRKVAVKVLSMSSAEGREVFENEAMMMISLQHRNLVKLFGYCAHKNKRLLVYEFVSGGSLDQLLFGKDSNGKQQLDWPRRHGIIQDIAWGLRYFHQHSPKSIIHGDIKPYNILIDKQWKPIITAFWTSHTLQPNETEVRVDGLSGTWGYIAPELVYSSTIATQKRDVYSLGVTILEIISSKRVNKFEGFAKNMMDEAYELYQEGRSLEFMDRTLKASAVAEEVDKCIAIGLLCAQGDPELRPNMKDVVFMLENQGDVERTIGRPGLSGYDDRLCVNPINPDSPIFIDSDDDIVLPR 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1771 503 Gene3D Transferase(Phosphotransferase) domain 1 262 468 - -
Glsi09g1771 503 Gene3D Transferase(Phosphotransferase) domain 1 16 130 - -
Glsi09g1771 503 FunFam Lectin-domain containing receptor kinase A4.3 262 470 - -
Glsi09g1771 503 ProSiteProfiles Protein kinase domain profile. 186 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1771 503 SUPERFAMILY Protein kinase-like (PK-like) 27 80 IPR011009 -
Glsi09g1771 503 Pfam Protein kinase domain 187 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1771 503 Gene3D Phosphorylase Kinase; domain 1 146 261 - -
Glsi09g1771 503 ProSitePatterns Protein kinases ATP-binding region signature. 192 214 IPR017441 GO:0005524
Glsi09g1771 503 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 159 261 - -
Glsi09g1771 503 SUPERFAMILY Protein kinase-like (PK-like) 169 459 IPR011009 -
Glsi09g1771 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Glsi09g1771 503 MobiDBLite consensus disorder prediction 128 152 - -
Glsi09g1771 503 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 118 - -
Glsi09g1771 503 SMART serkin_6 186 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1771 Glsi-ChrGlsi09 17215469 17225623 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1771 173 477 Receptor kinase-like Gene Family AT4G11530 41.290 1.56e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi09g1771 Pkinase 6e-39 CL0016