Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1756 ATGTTGGCCTCCACAATCCTAACACCCTCTAAGCTGAACCTTTTGCATTTCGTCTTACCCACATCAAGCGCCGACATAGAAATCCTTCCAAGTGGAAGCAGAAAATGCCGGAGAAGCAGAGTGGAAGTTTATTCCAAATTAACCCATCGGAATTGTCGTCTCTACCATAAATCGTACTCTGGACTTGGCGTGGTCACAAGGGTCAGTAATGGTGGTGATGGCCCGTTGGATGGTCACGCTACCTCACAACAGTCTTCTCCTCCTGACATTGAAGAAGTAAAGAGTACCACTTCTGGCCTTGGTGATGGTTATGTGGCCTTGTTTGTTCGTATGTTAGGTTTAGATCATGATCCCCTTGATAGAGAACAGGCTATAATTGCTCTTTGGAAATATTCACTTGGTGGAAAGAAGTGTATCGATAATTTAATGCAGTTTCCTGGTTGTATTAATCTTACTGTGAACCTCCTTAGATCAGAGTCTAGTTCAGCATGTGAAGCAGCTGCAGGCCTTTTGCGATCACTATCTTCAGTCAATTTATACAGGAATTCTGTAGCAGATAGTGGAGCGATAGAAGAGATAAATAGATTGCTGAGGCAATCTTCCTTGGCTCCTGAGGTAAAGGAGCAGAGTATGAGTACATTGTGGAATTTATCTGTAGATGAGAAGCTGCGCATTAAATTTGCAAACAGTGATATCCTGCCATTGATTATTAAGTTCCTTGATGATGAGGATATAAAAGTGAAGGAAGCTGCGGGAGGCATATTGGCAAATTTAGCATTGAGTCATGTTAACCACAGCATTTTGGTTGAAGCAGGTGTTATACCAAAATTGGCAAAGTTCTTAACTTCTGATCCAGAAGGATCTAAAGTCATTAAGAAGGAAGCAAGGAACGCATTGCTGGAACTTGTTAAGGATGAATATTATAGAATTCTTGTTGTTGAGGAAGGTTTGGTTCCTGTTCCATTAATTGGTGCTGGGGCCTATAAGTCATTCACCCCTGGTCTGCATTCCTGGCCCACGTTACCAGATGGTACACAGATTGAACGAACTTCTAGAGAACCTTCCAGGTATGGTGCATCAGAATTACTTCTTGGATTAAATATTGATGACAGGAATGCTAACATAGAGGAAGCAAAAATGAATGCAATTATTGGACGGACACAACAACAATTCCTTGCTCGAATTGGGGCTATAGAATGGGAAGGAAAAATGACATCTCATTCTGAAAGCTCTGATAATCAACGACTTACTCTTTTACCTTGGATGGATGGTGTTGCCCGCTTGGTATTGATTTTAGAACTAGAAGATAAGTCGGCCATAACAAGGGCTGCAGAGTCAATTGCTGACGTATCTATCAATGAACATATGCGTGTTGCATTCAAGGAGGCTGGAGCAATTAAACATTTGGTTCGGCTTTTGAATTTTGATGACAATGCTGTCAGATTGGCTGTAACTCGAGCTTTGGAGAGGTTGTCTGCTAGCAATGTAGTTTGCCAGATAATTGAAGCTGAGGGTGTATTAGGTCCATTAATTAGTATTCTGAAATGCTCAGAGATTTCTGAAACTGTAGAGGAAAAGACTTTAAATACACTTGCTCGAATATTAGACCCCAGTAAAGAGATGAAATTGAAGTTTTATGATGGACCAGTTAATGGATCTAAGAAGGCCTTTGATGGAGTTAAATATGATGCATTTTCAACCGGGCTAAGTACCACTGAACAAGCCATAGCAAAAACAATTACCAGGAATGATATACTGGATTCTGTTTTTGTTGCTCGCCTTGTTGAGATTCTGAAGTCCTCTACTTCCAGTTTACAAGGAAAAGCTGCATCGGTGCTCGAGTTTGTGGCACTGACTGACCCAAATATGGTCTCTAATATATCTGTGGATGTTGAATCTGGTCTCAATGCTGTTTTTCAGCAAAAAATTTTGAGAATTTCAGCAGATGCGGAATCTGATATAGAAGATCACCTTTCAAAAACATACTTAATTGAAGTTGAAGAAGCTGGTCTCGCAATATCTGCAGCATCCCGGTTACTGACAAGACTACTTGATTGTGAGCAGTTTCACAACAAAATAAACTCCTCCCATTTCATCGGCTTGCTTCGAGAAATCCTCAAGTCTGGAATCCCTCTCCACAGCAAAGACTGGGTAGCTGCTTGCCTAGTTAAACTGAGCTCCCTCTCTGGTCACAACCCAAGTTTCAACCCTATCAATGAGGAAGTCATGCTTTACGAGACAATCCCGAGACTTGTAGAACAGATCAAAACTTCATTCTCTTCAGAATCACAGGAAGCTGCTGTAGTAGAACTCAACAGAATAATATCTGAAGGGCTGGTAGATTCTTCAAGAGCTATTGTTTCTGAGGGGATACTTTATCAATTGGTGAAGCTGATAGAAGCAGGCAGTGAAAAGGCAGTTGAAGCAGGCTTGGCAATTCTGTATAATCTGAGCATGGACAGTGAAAATCTATCCGCAATTGTGGCTGCTGGAGCAGTCCCAGTATTGAGAAGAATTGTTCTATCACAAAGGCCTCAATGGGTTAGGGCACTTCATTTGCTTAGGAGTTTGCCAACTTGA 2580 0.414 MLASTILTPSKLNLLHFVLPTSSADIEILPSGSRKCRRSRVEVYSKLTHRNCRLYHKSYSGLGVVTRVSNGGDGPLDGHATSQQSSPPDIEEVKSTTSGLGDGYVALFVRMLGLDHDPLDREQAIIALWKYSLGGKKCIDNLMQFPGCINLTVNLLRSESSSACEAAAGLLRSLSSVNLYRNSVADSGAIEEINRLLRQSSLAPEVKEQSMSTLWNLSVDEKLRIKFANSDILPLIIKFLDDEDIKVKEAAGGILANLALSHVNHSILVEAGVIPKLAKFLTSDPEGSKVIKKEARNALLELVKDEYYRILVVEEGLVPVPLIGAGAYKSFTPGLHSWPTLPDGTQIERTSREPSRYGASELLLGLNIDDRNANIEEAKMNAIIGRTQQQFLARIGAIEWEGKMTSHSESSDNQRLTLLPWMDGVARLVLILELEDKSAITRAAESIADVSINEHMRVAFKEAGAIKHLVRLLNFDDNAVRLAVTRALERLSASNVVCQIIEAEGVLGPLISILKCSEISETVEEKTLNTLARILDPSKEMKLKFYDGPVNGSKKAFDGVKYDAFSTGLSTTEQAIAKTITRNDILDSVFVARLVEILKSSTSSLQGKAASVLEFVALTDPNMVSNISVDVESGLNAVFQQKILRISADAESDIEDHLSKTYLIEVEEAGLAISAASRLLTRLLDCEQFHNKINSSHFIGLLREILKSGIPLHSKDWVAACLVKLSSLSGHNPSFNPINEEVMLYETIPRLVEQIKTSFSSESQEAAVVELNRIISEGLVDSSRAIVSEGILYQLVKLIEAGSEKAVEAGLAILYNLSMDSENLSAIVAAGAVPVLRRIVLSQRPQWVRALHLLRSLPT 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1756 859 MobiDBLite consensus disorder prediction 73 94 - -
Glsi09g1756 859 Gene3D - 666 858 IPR011989 -
Glsi09g1756 859 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 231 273 IPR000225 GO:0005515
Glsi09g1756 859 SMART arm_5 494 536 IPR000225 GO:0005515
Glsi09g1756 859 SMART arm_5 779 819 IPR000225 GO:0005515
Glsi09g1756 859 SMART arm_5 177 219 IPR000225 GO:0005515
Glsi09g1756 859 SMART arm_5 220 260 IPR000225 GO:0005515
Glsi09g1756 859 SMART arm_5 261 304 IPR000225 GO:0005515
Glsi09g1756 859 SMART arm_5 135 176 IPR000225 GO:0005515
Glsi09g1756 859 SMART arm_5 453 493 IPR000225 GO:0005515
Glsi09g1756 859 SMART arm_5 736 776 IPR000225 GO:0005515
Glsi09g1756 859 MobiDBLite consensus disorder prediction 76 93 - -
Glsi09g1756 859 Gene3D - 401 665 IPR011989 -
Glsi09g1756 859 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 790 832 IPR000225 GO:0005515
Glsi09g1756 859 SUPERFAMILY ARM repeat 108 322 IPR016024 -
Glsi09g1756 859 Gene3D - 94 324 IPR011989 -
Glsi09g1756 859 SUPERFAMILY ARM repeat 418 843 IPR016024 -
Glsi09g1756 859 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 49 859 - -
Glsi09g1756 859 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 188 221 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1756 Glsi-ChrGlsi09 16837047 16844131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1756 128 320 U-box Gene Family AT2G23140 30.570 6.72e-11 63.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1756 09 16837047 16844131 Glsi09g1756 09 16837047 16844131 ECH