Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1714 ATGCTTAGGCTTCCATGCCTTTGTTGTGCACCAGGTTGCAAGCACAACATTGACCACCCAAGAGCAAGGCCTCTGAAGGATTTTAGAACCCTTCAAACACATTATAAGAGGAAGCATGGGATCAAACCCTACATGTGCAAAAAATGTGGCAAAGCATTTGCAGTGAAAGGTGATTGGAGAACTCATGAGAAGAATTGTGGCAAAATATGGTATTGTCTTTATGGGTCTGATTTCAAACACAAGAGATCTCTAAAAGACCACATTAAGGCATTTGGCCAGGGCCATGGAGATTTTGGCATTGATTGCTTGCAAGAGGAAGATGAAGCAGTTTCCGAGATTGAACAAGATGGGGAGAACTCTGTGTGA 366 0.429 MLRLPCLCCAPGCKHNIDHPRARPLKDFRTLQTHYKRKHGIKPYMCKKCGKAFAVKGDWRTHEKNCGKIWYCLYGSDFKHKRSLKDHIKAFGQGHGDFGIDCLQEEDEAVSEIEQDGENSV 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1714 121 FunFam Zinc finger protein WIP2 13 95 - -
Glsi09g1714 121 ProSiteProfiles Zinc finger C2H2 type domain profile. 44 64 IPR013087 -
Glsi09g1714 121 SUPERFAMILY beta-beta-alpha zinc fingers 27 64 IPR036236 -
Glsi09g1714 121 Gene3D Classic Zinc Finger 29 66 - -
Glsi09g1714 121 PANTHER ZINC FINGER PROTEIN WIP2 1 117 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1714 Glsi-ChrGlsi09 15107758 15108123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1714 1 115 C2H2 Transcription Factor Family AT3G57670 83.478 7.29e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Glsi09g1714 None None None