Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1682 ATGTCTGATTCCCCTTCTCCTCCCAAAATCACTACTATATCCTCACTAACCCAACCTCATTGTATTTCTACATACTGCACCAACCTGTTCACCTCAATTCCTCATCTGGAAGATGAAGGTAGAAGTAGAGGGTTGCACGGGCAATCCCAGCAAAGCTCAAGGTGGACTCCAACAACAGCACAGTTACTAATTCTTCAAGAACTGTATAGGCAAGGAACGAAGACACCAACAGCCGAACAAATCCACCAAATAGCTTCACAGCTCCGTAGGTTTGGGAAGATTGAAGGGAAGAACGTGTTCTATTGGTTCCAGAATCACAAAGCAAGAGAGCGCCAGAAACGACGTCGTCGGGAGATGGAGGAAACTGCTGCTTCTGATTCTGCTGAGAATCATAAAGAGATGCTGTACGGTATGGGAAGCTCAGAAAATCAAGAGCATGCAGGGTTTAGAGGGACAGGTTATGAAGTTAAAGAGACAAAGAAGACGGCATCTACTTCAAACTGCAGTGGACTTGCAGAGGAAGCTGCTTCACTGGACATAGCAGAAAGTGGACCAAATGGCTGGACAAAGTTTGAGGAGAGAGGAAACACATTAGAAACAAAAGCTAAGTGCCAAAATGTAGATCAGCTCAGAACAACTACCATCAATTCAACTTCAACAGTACAAAACTCAACATCTCAGTATCATAATTTACCATTTATTCTCAAGAGAGAGAATTTCAGTACCTATTATGGCGAAGAAAATGCTAGCACTAGAAAGACCCTTGAGCTTTTTCCACTGAAGAGGGATGACCAAGATGGCATGATCTCCTTCAATGAAAGGAGATCTAGATTCTGTGCTTCAACCTCTGTGGCCACTCAAATCACCACCTCAAGCAAGTTTTTTGAGTTTCTTCCTTTAAAAGACCGAAGGAATATATAG 921 0.43 MSDSPSPPKITTISSLTQPHCISTYCTNLFTSIPHLEDEGRSRGLHGQSQQSSRWTPTTAQLLILQELYRQGTKTPTAEQIHQIASQLRRFGKIEGKNVFYWFQNHKARERQKRRRREMEETAASDSAENHKEMLYGMGSSENQEHAGFRGTGYEVKETKKTASTSNCSGLAEEAASLDIAESGPNGWTKFEERGNTLETKAKCQNVDQLRTTTINSTSTVQNSTSQYHNLPFILKRENFSTYYGEENASTRKTLELFPLKRDDQDGMISFNERRSRFCASTSVATQITTSSKFFEFLPLKDRRNI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1682 306 ProSiteProfiles 'Homeobox' domain profile. 48 113 IPR001356 GO:0003677
Glsi09g1682 306 SUPERFAMILY Homeodomain-like 48 115 IPR009057 -
Glsi09g1682 306 Pfam Homeodomain 52 112 IPR001356 GO:0003677
Glsi09g1682 306 Gene3D - 40 128 - -
Glsi09g1682 306 CDD homeodomain 54 108 IPR001356 GO:0003677
Glsi09g1682 306 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 41 297 IPR044555 GO:0003700|GO:0099402
Glsi09g1682 306 SMART HOX_1 50 117 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1682 Glsi-ChrGlsi09 13941568 13944304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1682 46 218 Wox Gene Family AT3G18010 40.805 9.89e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Glsi09g1682 Homeodomain 3.8e-18 CL0123