Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1666 ATGCTTGATAAAGATTTTTTCACTGAGTATGGGGAGGCAAGTCAATATGAAATTCAAGAAGTGGTTGGCAAAGGCAGCTATGGTGTTGTTGCATCTGCAGTTGATACCTACAGTGGAGAGAGGGTAGCTATCAAGAAGATGAACAATGTCTTCGAGCATGTTTCTGATGCCACACGCATTCTACGAGAAATAAAGATCCTTCGGTTGCTCAAACATCCAGATATTGTCGAGATAAAGCATATCATGCTTCCTTCATGCCGAAGAGAATTCGAAGATATTTATGTGGTTTTCGAGTTGATGGAATCTGATCTTCATGAAGTTATTGAAGCAAATGATGATCTCACTCCTGAACATTACCAGTTCTTTTTGTACCAGCTTCTTCGAGCTTTAAAATACATACATTCAGCAAATGTCTTCCATCGAGATTTGAAACCAAAAAACATTCTTGCTAATGCAGACTGCAAACTAAAGATATGTGATTTTGGCCTTGCTCGTGCATCTTTTGATGATGCTCCATCTGCCATTTTTTGGACAGATTATGTGGCAACTCGATGGTACCGTGCTCCTGAACTATGTGGCTCTTTTTTCTCCAAGTATACCCCTGCTATAGACATCTGGAGCATAGGATGTATTTTTGCAGAAATGCTAATTGGGGAACCTTTATTTCCTGGAAAGAATGTGGGGCATCAATTGGATCTCATAACTGACTTGCTTGGCACTCCTTCTGTTGAATCCATTGCTAGGATTCGAAATGAAAAAGCTAGAAGATATTTAAATAACATGGGGAGAAAAGCATCCATTCCTTTCTCAGAAAAATTCCCTCGTGCAGACCCAATGGCCCTTTGTTTACTTCAGCGCTTGCTGGCCTTCGATCCCAAGCAGCGTCCATCGGCTGAAGAGGCATTAGCCGATCCTTACTTTTATGGATTAGCAAATTTGGATGATGAAACATCCATGAAACCAATTTCAAAGTTTGAGTTTGAGTTTGAAAGAAGAAAATTGACCAAAGATGATATAAGAGAACTAATTTATAGAGAGATTTTAGAGTATCATCCTGAGATGCTGCAGGAGTACCTTCAAGGTGCAGAAAAGACTAGCTTTATGTATCCCAGTGGACTTGATGGCTTCAAGCAACAATTTGCTGATCTTGAAGAAAATAATGGCAAAGGTGAAAGAAGCACGCTACTCCAAAGGAAATATACCTCACTGCCCAGGGAGCGGGTTTATGCAGCCAAGGAGGAGGCAACTGAAAAAGAGAGTTCATTTAAGAAAAATAATGCAGCTTCTGCCATACATGCAACCCTTGAGAGTCCTCCAAGATCCCAGACGGTCGAAGAACTAGCAGATACTTGCAGAAATTCATTGACAATGCAGAACGGCTCTTGCAAATCGGCTTACAATGGTCATAGACTTGTAAAAAGTGCTAGTATTAGTGCTTCTATGCGTGTAGATGTTATGGAACAAAAAACTGTGAGATTAACATACAATGTTGTTCTTAATTTTGCATGGTACTGGCGTACTGCTTTCATTTGCATGCTAGCATTTGTATTTGGGTTAGTTCATGTATGTGCCACACAACGTATAACATTTGAGCTTTCTGTTTTCCTGCACAGGTAG 1617 0.402 MLDKDFFTEYGEASQYEIQEVVGKGSYGVVASAVDTYSGERVAIKKMNNVFEHVSDATRILREIKILRLLKHPDIVEIKHIMLPSCRREFEDIYVVFELMESDLHEVIEANDDLTPEHYQFFLYQLLRALKYIHSANVFHRDLKPKNILANADCKLKICDFGLARASFDDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLIGEPLFPGKNVGHQLDLITDLLGTPSVESIARIRNEKARRYLNNMGRKASIPFSEKFPRADPMALCLLQRLLAFDPKQRPSAEEALADPYFYGLANLDDETSMKPISKFEFEFERRKLTKDDIRELIYREILEYHPEMLQEYLQGAEKTSFMYPSGLDGFKQQFADLEENNGKGERSTLLQRKYTSLPRERVYAAKEEATEKESSFKKNNAASAIHATLESPPRSQTVEELADTCRNSLTMQNGSCKSAYNGHRLVKSASISASMRVDVMEQKTVRLTYNVVLNFAWYWRTAFICMLAFVFGLVHVCATQRITFELSVFLHR 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1666 538 FunFam Mitogen-activated protein kinase 102 330 - -
Glsi09g1666 538 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 15 357 - -
Glsi09g1666 538 SUPERFAMILY Protein kinase-like (PK-like) 12 311 IPR011009 -
Glsi09g1666 538 Gene3D Transferase(Phosphotransferase) domain 1 102 330 - -
Glsi09g1666 538 ProSiteProfiles Protein kinase domain profile. 16 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1666 538 Pfam Protein kinase domain 16 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1666 538 ProSitePatterns Protein kinases ATP-binding region signature. 22 46 IPR017441 GO:0005524
Glsi09g1666 538 SMART serkin_6 16 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1666 538 ProSitePatterns MAP kinase signature. 51 154 IPR003527 GO:0004707|GO:0005524|GO:0006468
Glsi09g1666 538 FunFam Mitogen-activated protein kinase 6 110 - -
Glsi09g1666 538 Gene3D Phosphorylase Kinase; domain 1 32 353 - -
Glsi09g1666 538 CDD STKc_TDY_MAPK 15 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1666 Glsi-ChrGlsi09 13741806 13748621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1666 2 480 MAP Kinase Gene Family AT3G18040 75.574 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Glsi09g1666 Pkinase 3.8e-67 CL0016