Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1654 ATGGAGCTCGACTTATACAACACGACAGAAGAGATGGGGTGGGATATTGCAGACAGCGATCGGGAAATCCTGAACCTGCTGTTGAAAGTGGCCGTTTGGGGAGTACACCAGCACGCTTCCCTTATTCAGCAACGAGATCACTGGGCCTGTACATGTGTGCCATGGCTCCAAGCACACCAAGGAAAAGGGGTTAGAGTTGAAGGAGAAGCCGAAGACGAGGTGCTTATACCAGAATTAGAGGACAAAGAAGAAGAGGAATCCGGCGATAGAGTTTTGTCGTCCTCAGTAGTGTTAAGATCAATCAAACCCATCATAGGAGCTGACCCAATACTCCAAAAAGAAACAGACCCCCTTTTCTTTTTGGACAGCCGTAGGGTGTTGATCTCCAAAGCATTGAACCCTCCATCAGAGCAGAGGTTGATTAGTTCAAGAGCAGTGATGGAGGCTGATACAATTGATTTCTCATCATCTTACTATAACATTCTTGGTGTGCATTCGGATTCTTCCATTGAAGAAATAAGGCGTGCTTATCGCAGGCTTGCAATGCAATGGCATCCAGATAGATGGACAAGAACTCCTTCTTTACTGGGTGAAGCCAAACGGAAGTTCCAGAAAATTCAGGAAGCCTATTCAGCAGTACTATCAGACCCCAAGAAAAGAACGATGTATGATGCAGGCTTGTACGACCCTCAAGAAGAAGAGGATGAGGGCTTTTCTGATTTTATGCAAGAAATGTTGTCCCTGATGACTCAAGTGAGAAGAGAGGAAAAGGATTACAGTATGGAGGAGTTGCATAACATGTTAATGGAAATGGTTCAAGAATCTGAGGCTCCATCACGGCACTGTGGATCCTCAGTTGTTGAAGAATCTCGGTGCTCGAAGAGGATGCGTTTGGATTCGACCGTGATGGGAAATGGTCTTGGCTTTCAGTTCCATGAAACCAGGGTTTAG 951 0.4574 MELDLYNTTEEMGWDIADSDREILNLLLKVAVWGVHQHASLIQQRDHWACTCVPWLQAHQGKGVRVEGEAEDEVLIPELEDKEEEESGDRVLSSSVVLRSIKPIIGADPILQKETDPLFFLDSRRVLISKALNPPSEQRLISSRAVMEADTIDFSSSYYNILGVHSDSSIEEIRRAYRRLAMQWHPDRWTRTPSLLGEAKRKFQKIQEAYSAVLSDPKKRTMYDAGLYDPQEEEDEGFSDFMQEMLSLMTQVRREEKDYSMEELHNMLMEMVQESEAPSRHCGSSVVEESRCSKRMRLDSTVMGNGLGFQFHETRV 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1654 316 SMART dnaj_3 156 219 IPR001623 -
Glsi09g1654 316 PRINTS DnaJ domain signature 198 218 IPR001623 -
Glsi09g1654 316 PRINTS DnaJ domain signature 177 192 IPR001623 -
Glsi09g1654 316 PRINTS DnaJ domain signature 159 177 IPR001623 -
Glsi09g1654 316 CDD DnaJ 158 216 IPR001623 -
Glsi09g1654 316 Pfam DnaJ domain 158 224 IPR001623 -
Glsi09g1654 316 Gene3D DnaJ domain 155 276 IPR036869 -
Glsi09g1654 316 PANTHER PUTATIVE, EXPRESSED-RELATED 155 280 - -
Glsi09g1654 316 ProSiteProfiles dnaJ domain profile. 157 227 IPR001623 -
Glsi09g1654 316 SUPERFAMILY Chaperone J-domain 157 230 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1654 Glsi-ChrGlsi09 13490335 13499040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1654 158 225 C2H2 Transcription Factor Family AT1G74250 47.826 5.45e-12 64.7