Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1636 ATGGCGATCAAAAGGAATGTGGTGGTTCTCACTGGGCTTGCCATTATAATAAGCCTTGTCTCTGTGGCATCTGCCATTCCTGGAACTGCCACTTTCTACACTACTTACTATCCAAATGCATGTGGCCTCGAAAACCAGGGAACTATGATAGCAGCTGCGAGCGATCCCCTTTGGGACAATGGAGCTGCATGTGGAAGAATGTATACCGTAACATGCACAGGAGGAACCAATGCTGTGCCAAACCCTTGCAGGGGAGGCAGTGTCACAGTCAAGATCATAGATCGTTGCCCTTCCCCAGGATGCCAAGCCACCCTTGATCTCTCTCAGGAAGCTTTCGCTATCATTGCTAACCCTGATGCAGGAAAAGTCAATATTGACTACAACCAGGACAGAAACATGGAAACAAAAGGGGAGGCTGAGGATACAGAGGACCATCTTTCTGATTCTCAGTTTCAGCACTTACCTTGTCATCTGTGCAATCATTTCCATCTTCTCCTCGTCCTTAATGAAAGCCATAAATCTCTGCCACGTTTTGCTGGAAAAGGTGGCAAAACTTTCCTTTTCTCTTCACCTTTTGTTGCTGTGCTTTATAATGTATGA 600 0.4617 MAIKRNVVVLTGLAIIISLVSVASAIPGTATFYTTYYPNACGLENQGTMIAAASDPLWDNGAACGRMYTVTCTGGTNAVPNPCRGGSVTVKIIDRCPSPGCQATLDLSQEAFAIIANPDAGKVNIDYNQDRNMETKGEAEDTEDHLSDSQFQHLPCHLCNHFHLLLVLNESHKSLPRFAGKGGKTFLFSSPFVAVLYNV 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1636 199 CDD DPBB_EG45-like 26 128 - -
Glsi09g1636 199 SUPERFAMILY Barwin-like endoglucanases 14 129 IPR036908 -
Glsi09g1636 199 FunFam Barwin-related endoglucanase 25 129 - -
Glsi09g1636 199 Gene3D - 18 130 IPR036908 -
Glsi09g1636 199 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 38 137 IPR007112 -
Glsi09g1636 199 SMART dpbb_1 50 127 IPR007112 -
Glsi09g1636 199 Pfam Lytic transglycolase 51 127 IPR009009 -
Glsi09g1636 199 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 6 129 IPR044206 GO:0009627|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1636 Glsi-ChrGlsi09 13218674 13227861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1636 49 129 Expansin Gene Family AT2G45110 32.609 2.90e-07 47.8