Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1628 ATGGCGGCTTTTGGCGGGAAAAGGGTAAGCCAGCTGTTCCGAGGCAATGGTCTAGGCCACGTCCTCGCCGCGGCGGCCGTTACTCTTCTCGTCCGCCTCTTCTCGGGTCCTGGCCCCGGACTCTCGCCGGAAAATGAAAATGAGGATTACGAAGATAGGGAGGAAAACGACGTTGAGTTTGTTGACAAGGGTGAAGCTCCGGCTACCGGAAAATTTTTGCCAGTCACTATTAGGTGGAGCAATATCACGTGCTCACTTTCTGAAAAATCCTCCGAGTCCTCGAAATTTCTGCTAAACAATGTGAGTGGGGAAGCGAAACCTGGAAGATTGTTAGCTATAATGGGGCCTTCAGGTTCAGGAAAAACAACGTTGCTTAATGTTCTTGCGGGCCAGCTGGCAGCATCGCCTTGGCTGCTTTTGTCAGGCATTCTGGAGTTCAATGGAAAGCGTAGTTCAAACAAAGCTTACAAGTTTGCTTATGTAAGACAGGAGGATCTCTTTTTCTCACAGCTCACAGTGCGGGAAACGTTGTCTTTTTCTACAGAACTGCAACTTCCTGACATGTCTTCGGTGGAAGAGAGAGATGAATATGTGAACAATCTTCTGTTCAAACTAGGCTTGGTCAGTTGTGCCAATACCATTGTTGGTGATGCCAAAGTCCGTGGTATTAGTGACGGTGAAAGGAAACGCTTAACTCTGGCATGTGAGCTGATTGCCCGCCCAGCTGTTATATTTGCTGATGAACCCACTACCGGACTTGACACCTTCCAAGCCGAGAAAGTCATGGAAACACTCCAACAACTTGCACATGATGGTCATACTGTAATTTGCTCTATACATCAGCCAAGAGGTTCAGTGTATAGAAAATTTGATGACATTGTCTTGCTAACAGAGGGTTCCCTTGTTTATACTGGTCCTGCCCGTGAGGAATTGTTGGCATACTTCTCAAAATTTGGGTACCACTGCCCAGATCATGTGAATCCTGCTGAATTTTTGGCTGATCTTATATCCATTGACTACAGTTCTGCTGAAAGTGTCTATTCCTCTAAAAAAAGGATTGATGGTCTTGTTGAGTCTTTCTCACAAAGGCTACCTGCTATAATTTGTGCAACTCCAATTACCCGAGATGAGCTCTCCAAAGGTGGAAAGAAAATCAGCAAAAGAACTATAGCTAAGAAGAAAGGAGGTTGGTGGAAACAATTCAGGTTGCTCCTTAAACGAGCATGGATGCAGGCTTTCCGTGATGGACCAACAAACAAAGTCCGGGCAAGGATGTCATTAGCATCAGCAATTATATTTGGGTCTGTTTTTTGGAAAATGGGAAGATCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTGCTGCAATAAACACAGCTATGGCTGCTCTCACAAAGACTGTAGGTGTGTTTCCAAAGGAACGTGCAATTGTAGATAGAGAACGTTCAAAGGGTTCCTATTCCTTGGGTCCATATCTGTTTTCAAAATTGTTGGCTGAGATTCCCATCGGAGCAGCATTTCCATTAATGTTTGGTGTTGTTCTGTACCCCATGGCACGTCTTCATCCTACTTTGCTGAGATTTGGGAAATTTTGTGGTATTGTCACTGTGGAATCTTTTGCTGCGTCTGCAATGGGTCTTACCGTTGGTGCTATGGTTCCAACTACTGAAGCAGCTATGGCAGTGGGCCCCTCTCTCATGACAATTTTTATTATATTTGGAGGTTACTATGTCAATCCTGGGAACACCCCAATCATCTTCCACTGGATTCCTCGTGTTTCTCTTATTAGATGGGCCTTTCAGGGACTCTGCATCAATGAATTTAGTGGTCTTCAATTTGATCACCAGCATTCATTTGATGTTCAAACTGGAGAACAGGCACTGGAGCGCATTTCCTTTGGAGGAAGTAGCATTAGGGACACGGTGGTAGCACAAAGTAGAATACTGATATTTTGGTATTGCACCACCTACCTTCTCCTAGAGAAAAACAAGCCCAAGCACCAGCAACTTGAGCCACCTCTTTATTACAAGAAATCGCATGTAAAACTTGAGGAGTTAAACCCTGAACATGTTGACCAGCCACTTGAACATTCACCAGTTAGTCAAGTTGAATCTAACCAGAAGCTCGAATCTCCTCAAGTTGATCTTATTGGACCTTTTATCCTTGAAGGTTTGTAA 2184 0.4451 MAAFGGKRVSQLFRGNGLGHVLAAAAVTLLVRLFSGPGPGLSPENENEDYEDREENDVEFVDKGEAPATGKFLPVTIRWSNITCSLSEKSSESSKFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPWLLLSGILEFNGKRSSNKAYKFAYVRQEDLFFSQLTVRETLSFSTELQLPDMSSVEERDEYVNNLLFKLGLVSCANTIVGDAKVRGISDGERKRLTLACELIARPAVIFADEPTTGLDTFQAEKVMETLQQLAHDGHTVICSIHQPRGSVYRKFDDIVLLTEGSLVYTGPAREELLAYFSKFGYHCPDHVNPAEFLADLISIDYSSAESVYSSKKRIDGLVESFSQRLPAIICATPITRDELSKGGKKISKRTIAKKKGGWWKQFRLLLKRAWMQAFRDGPTNKVRARMSLASAIIFGSVFWKMGRSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERAIVDRERSKGSYSLGPYLFSKLLAEIPIGAAFPLMFGVVLYPMARLHPTLLRFGKFCGIVTVESFAASAMGLTVGAMVPTTEAAMAVGPSLMTIFIIFGGYYVNPGNTPIIFHWIPRVSLIRWAFQGLCINEFSGLQFDHQHSFDVQTGEQALERISFGGSSIRDTVVAQSRILIFWYCTTYLLLEKNKPKHQQLEPPLYYKKSHVKLEELNPEHVDQPLEHSPVSQVESNQKLESPQVDLIGPFILEGL 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1628 727 Gene3D - 74 316 IPR027417 -
Glsi09g1628 727 Pfam ABC transporter 98 250 IPR003439 GO:0005524
Glsi09g1628 727 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 57 629 - -
Glsi09g1628 727 Pfam ABC-2 type transporter 400 610 IPR013525 GO:0016020|GO:0140359
Glsi09g1628 727 SMART AAA_5 107 299 IPR003593 GO:0016887
Glsi09g1628 727 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 309 IPR027417 -
Glsi09g1628 727 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 77 323 IPR003439 GO:0005524
Glsi09g1628 727 FunFam ABC transporter G family member 7 75 313 - -
Glsi09g1628 727 CDD ABCG_EPDR 74 305 - -
Glsi09g1628 727 Pfam ABC-2 type transporter 280 337 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1628 Glsi-ChrGlsi09 13156255 13166862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1628 97 309 Calmodulin-binding Proteins AT2G36910 27.189 5.48e-11 64.3