Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi09g1599 | ATGGCTTCACGCAGACTCTTATCGTCTCTGATTCGATCCTCCACACGTCGATCTCCAGTGAAATCCTCCATTACCGGCTCAAGCCCCAGACTTTCTTCTCCTAGCGTTTCGGGTCGTCCTTCTCCGTATGGATACCTCCTCACTCGCTTCGCCGAGTACGCCACCTCTGCTGCAGCTGCTGCTCCACCAGCTCCGCCGAAGAAGGATGCCGCTAGTGGTGGTGGTGGTGGGAAGATCGTCGATGAATTCACTGGCAAAGGTTCGATCGGGCAAGTATGCCAGGTCATTGGTGCCGTTGTCGATGTTAGATTCGAGGAGGGTTTGCCCCCGATCTTGACTGCGCTTGAGGTTTTGGATAATTCGATCCGATTGGTACTGGAGGTGGCGCAACACTTGGGTGAGAGCATGGTTAGAACTATTGCTATGGATGGGACTGAAGGGCTTGTTAGAGGACAGCGCGTCCTCAACACCGGGTCCCCTATCACCGTTCCTGTTGGTAGGGCAACCCTTGGCCGTATCATTAATGTCATTGGGGAGCCTATCGATGAGAAGGGTGAAATTAAAACTGAGCACTATTTGCCCATCCATAGAGAAGCTCCTGCTTTTGTTGAGCAAGCAACTGAGCAGCAGATCCTTGTTACAGGGATTAAGGTTGTGGACCTACTTGCACCATACCAAAGGGGTGGAAAGATTGGGTTGTTTGGTGGTGCTGGTGTAGGAAAAACGGTGCTTATTATGGAACTTATCAACAATGTTGCAAAGGCTCATGGTGGTTTCTCTGTATTTGCTGGTGTTGGAGAAAGAACCCGAGAGGGTAATGACTTGTACAGAGAAATGATTGAGAGTGGTGTCATTAAGCTTGGTGAAAAGCAGAGTGACAGCAAATGTGCTCTTGTATATGGTCAAATGAATGAGCCCCCTGGTGCTCGTGCCCGTGTTGGTCTTACTGGGCTTACTGTAGCTGAACACTTCCGTGATGCTGAAGGGCAAGATGTGCTTCTTTTTATTGACAACATTTTCCGCTTTACCCAAGCTAACTCTGAGGTGTCTGCTTTGTTGGGTCGTATCCCATCTGCTGTTGGTTACCAGCCAACGTTGGCTACTGATCTTGGAGGTCTTCAAGAACGTATTACAACCACCAAGAAAGGTTCAATTACCTCTGTCCAAGCTATCTATGTGCCTGCTGATGACTTGACAGATCCAGCTCCTGCTACCACCTTCGCTCACTTGGATGCTACAACTGTGTTATCACGACAGATCTCTGAGCTGGGTATCTATCCTGCTGTTGACCCCCTGGATTCTACATCTCGTATGCTTTCTCCACATATTTTGGGTGAGGACCACTATAATACTGCTCGTGGTGTACAAAAAGTTCTTCAGAACTACAAGAATCTTCAAGATATCATTGCTATTTTGGGAATGGATGAGCTCAGTGAAGATGATAAGTTGACTGTTGCTCGTGCACGTAAAATTCAAAGGTTCTTGAGCCAGCCTTTCCATGTCGCAGAAGTCTTCACTGGTGCTCCTGGCAAATATGTAGAGTTGAAGGAGAGCATTGACAGCTTCCAGGGCGTATTAGATGGCAAATACGACGACCTTGCAGAGCAATCATTTTATATGGTTGGAGGGATTGAGGAGGTCATTGCAAAGGCGGAAAAGATTGCCAAGGAATCAGCTTCTTAA | 1683 | 0.4801 | MASRRLLSSLIRSSTRRSPVKSSITGSSPRLSSPSVSGRPSPYGYLLTRFAEYATSAAAAAPPAPPKKDAASGGGGGKIVDEFTGKGSIGQVCQVIGAVVDVRFEEGLPPILTALEVLDNSIRLVLEVAQHLGESMVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRATLGRIINVIGEPIDEKGEIKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGEKQSDSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGAPGKYVELKESIDSFQGVLDGKYDDLAEQSFYMVGGIEEVIAKAEKIAKESAS | 560 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi09g1599 | 560 | CDD | ATP-synt_F1_beta_C | 443 | 550 | - | - | |
Glsi09g1599 | 560 | ProSitePatterns | ATP synthase alpha and beta subunits signature. | 427 | 436 | IPR020003 | GO:0005524 | |
Glsi09g1599 | 560 | SUPERFAMILY | N-terminal domain of alpha and beta subunits of F1 ATP synthase | 86 | 160 | IPR036121 | GO:0046034|GO:1902600 | |
Glsi09g1599 | 560 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 162 | 442 | IPR027417 | - | |
Glsi09g1599 | 560 | FunFam | ATP synthase subunit beta | 439 | 558 | - | - | |
Glsi09g1599 | 560 | FunFam | ATP synthase subunit beta | 161 | 438 | - | - | |
Glsi09g1599 | 560 | FunFam | ATP synthase subunit beta | 78 | 160 | - | - | |
Glsi09g1599 | 560 | Pfam | ATP synthase F1 beta subunit | 1 | 49 | IPR020971 | GO:0000275|GO:0005524|GO:0006754|GO:0016887 | |
Glsi09g1599 | 560 | Pfam | ATP synthase alpha/beta family, beta-barrel domain | 92 | 158 | IPR004100 | GO:0046034|GO:1902600 | |
Glsi09g1599 | 560 | PIRSF | ATPase_subunit_beta | 7 | 560 | - | - | |
Glsi09g1599 | 560 | Gene3D | - | 161 | 438 | IPR027417 | - | |
Glsi09g1599 | 560 | NCBIfam | F0F1 ATP synthase subunit beta | 89 | 554 | IPR005722 | GO:0015986|GO:0045261|GO:0046933 | |
Glsi09g1599 | 560 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Glsi09g1599 | 560 | Pfam | ATP synthase alpha/beta family, nucleotide-binding domain | 215 | 436 | IPR000194 | GO:0005524 | |
Glsi09g1599 | 560 | SUPERFAMILY | C-terminal domain of alpha and beta subunits of F1 ATP synthase | 439 | 555 | - | - | |
Glsi09g1599 | 560 | Gene3D | - | 439 | 560 | IPR024034 | - | |
Glsi09g1599 | 560 | Gene3D | - | 79 | 160 | - | - | |
Glsi09g1599 | 560 | PANTHER | ATP SYNTHASE | 71 | 557 | - | - | |
Glsi09g1599 | 560 | CDD | ATP-synt_F1_beta_N | 88 | 161 | - | - | |
Glsi09g1599 | 560 | Hamap | ATP synthase subunit beta [atpB]. | 87 | 554 | IPR005722 | GO:0015986|GO:0045261|GO:0046933 | |
Glsi09g1599 | 560 | CDD | F1-ATPase_beta_CD | 162 | 441 | - | - | |
Glsi09g1599 | 560 | SMART | AAA_5 | 227 | 499 | IPR003593 | GO:0016887 | |
Glsi09g1599 | 560 | Gene3D | ATP synthase, F1 beta subunit | 1 | 53 | IPR042079 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi09g1599 | Glsi-ChrGlsi09 | 12680553 | 12684208 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi09g1599 | 125 | 497 | Primary Pumps ATPases(2) | AT1G20260 | 29.426 | 5.87e-30 | 121 |