Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1584 ATGAAGGCCGCCCCATCCCGTGTTTCCATCCCAAATTTTGATTCCCCTAAATTAACAAGCTCTCTCTCTGTCTCTCTTGTTTTCCCAGGATTTGGAATTCTAGTATTCCTTCTATGCAGATACATCAGGAAAAGGAAGGCAGGCAATAACAGAGGGTTGATTTTGGAAAAAGACCAATCCTTCATGCCAAAAAGGTACCCTAACAATGATATCATTTCAATGACAAACCATTTTGAAGAAAAGTTGGGGGAAGGAAGCTTTGGTTCAACTTATAAAGGGCAACTTCCTAGCGGTGACTTGGTAGCTGTGAAAATTGTTGACAAGTGCAAGATTAGTGAGAAAGGTTTCATGAATCAGATTGCAAGAATTTGCAGAACAAAGCATGCTAATGTTATAGAGTTAATGGGTTTCTGTTCTGAGGCATCTAAAAAGGCACCTGTCTATGAGTACCTGCCTAATGGTGATGAGAAACTCTTGTCAGAAGAGCCATTAAGCTGTGATCAACAACAACAAATTGCTCTGGGAGTAGCTAGAGGGATTGAGAATCTACACACAGCAAGAGGGAATGACATCCTTCTTGACCAAAACTTGGTCCCAAAAATCTCAGATTTTGGCCTGACAATGTTTCAAGGGCAAAACTTGGGGTTTGGGAGTGTGACAGAAGCTGAGGCCAGAATGAGAAGGAAGTTTGTGCATAGTAGTATTATGGAGAATCCAAATAAACCCATCTCAGCGTCCTTCAATGTCCAAAGTGGTGGAAATGATGGAAGCTGGTGCCATAGATGA 786 0.416 MKAAPSRVSIPNFDSPKLTSSLSVSLVFPGFGILVFLLCRYIRKRKAGNNRGLILEKDQSFMPKRYPNNDIISMTNHFEEKLGEGSFGSTYKGQLPSGDLVAVKIVDKCKISEKGFMNQIARICRTKHANVIELMGFCSEASKKAPVYEYLPNGDEKLLSEEPLSCDQQQQIALGVARGIENLHTARGNDILLDQNLVPKISDFGLTMFQGQNLGFGSVTEAEARMRRKFVHSSIMENPNKPISASFNVQSGGNDGSWCHR 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1584 261 Gene3D Phosphorylase Kinase; domain 1 42 150 - -
Glsi09g1584 261 ProSiteProfiles Protein kinase domain profile. 76 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1584 261 Gene3D Transferase(Phosphotransferase) domain 1 151 236 - -
Glsi09g1584 261 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
Glsi09g1584 261 PANTHER RUST RESISTANCE KINASE LR10-RELATED 59 251 IPR045874 GO:0004672
Glsi09g1584 261 Pfam Protein tyrosine and serine/threonine kinase 77 208 IPR001245 GO:0004672|GO:0006468
Glsi09g1584 261 SUPERFAMILY Protein kinase-like (PK-like) 56 213 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1584 Glsi-ChrGlsi09 12518097 12519186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1584 33 206 Receptor kinase-like Gene Family AT4G18250 37.173 1.63e-32 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Glsi09g1584 PK_Tyr_Ser-Thr 1.5e-17 CL0016