Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1579 ATGTCTTATTTGGATAACGTCAGTGGGCCCCACAATTCGCCCACGTGTTCTTATCCACGCTGGAAAGTTCAAGGTTTTCTATACCATGTTGGTGATATTTTCTGCAAGTATTTTGGGAGAACTAAGGAAATGGAGAAAGTTTGTGAATTTTGTACATCTTTGAGGCCAGTAGTTTACTGTAAGGCTGATGAAGCATACCTTTGTCTATCCTGTGATGCAAAGGTCCATTTAGCCAATGCATTGTCCAGCCGGCACCCCCGAACCCTTCTTTGTAACCAATGCAGATACCATCTTGCCTATGTGCAGTGTTTGGATCACCAAATTCTGATCTGTCGTGGCTGTGATCAAAAGCTGCATGATCTCTCCTTAAAACACCAGAAACGAGTTGTCAGAAGTTACATTGGTTGTCCTTCTGCGAAAGACTTTGCAGCACTTTGGGGATTTGAATTGAATGAGATAGAAAGCAATGCTCTTTCAGATAAGTTTGCTTCCTTTTCATGTGGTTCCGCAAATTTGAATCCTTCAATGGGATTTGGAGCCAAATTTGAAGGGGGATCAAGCAGTCAACAAGGTCAGATATTGTACAAAGATCAAGAGCGACAAACTATTCTGCAGCAGATTATAGATTTGAAAAGGCTTCAGCTCAGTGAGGAGACTAATCATTCTCCCAAGATAACTGGGCTACAAGAAACAGACTCATCTTCTTCATTATATCATACGCGAAAGAAATATGATGAAAAATGTGATCAGCAAGCACAAAATTCCCAGGCTCTAGCTACTGATATTCAGGAAAATAACAGTCCCATGGAGGAGCTGAAGCTTGAAACTTTGTCTTCTACATTTTCTCAACTTGATAATTTACCTTCATCTTCAGTCACAGACCTTCCCTTGCACGGAGAGTCCTTCTGGACATGCAAAAGTCCCCTTCAAAGTAATCAGTTGTGGTCTCATAATATTCAAGACCTCGGGATATGTGAAGAACTTATTTGTCAAGATGATTTTAAGATACCTGATGTTGATTTAACATTCCAAAACTTTGAAGAATTATTTGGAGGAGATCAAGATCCAATTGGAGGGCTGATTGGTGATAATGATCTCTTCTACTCGTCTATAGAGAAGGATATATCAGATATTTATAGTGAAAGCACAATAGAGGATTCTTCGGCAGCTGTATCCATTACTATCTCCCAATCTGCTCATGAGGACAAGGAGATTAGACCATCTCATTCAACTATGTCATTCTCCATTTCAAGATTTAATGCTGAAAGCAGTGTAGGGAAGGGAAAGTATAAAAAGAAGTCTCAACTGTGTGAAAAGCAAGTTCCACTCCAATCCAAGAAACCTGGACCTAATCAATACTTGTTTTTGTCTTCCTATGATTTGAACTCTGATACCCAGGCTGGCCGTGAAGATACATGA 1419 0.4003 MSYLDNVSGPHNSPTCSYPRWKVQGFLYHVGDIFCKYFGRTKEMEKVCEFCTSLRPVVYCKADEAYLCLSCDAKVHLANALSSRHPRTLLCNQCRYHLAYVQCLDHQILICRGCDQKLHDLSLKHQKRVVRSYIGCPSAKDFAALWGFELNEIESNALSDKFASFSCGSANLNPSMGFGAKFEGGSSSQQGQILYKDQERQTILQQIIDLKRLQLSEETNHSPKITGLQETDSSSSLYHTRKKYDEKCDQQAQNSQALATDIQENNSPMEELKLETLSSTFSQLDNLPSSSVTDLPLHGESFWTCKSPLQSNQLWSHNIQDLGICEELICQDDFKIPDVDLTFQNFEELFGGDQDPIGGLIGDNDLFYSSIEKDISDIYSESTIEDSSAAVSITISQSAHEDKEIRPSHSTMSFSISRFNAESSVGKGKYKKKSQLCEKQVPLQSKKPGPNQYLFLSSYDLNSDTQAGREDT 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1579 472 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Glsi09g1579 472 MobiDBLite consensus disorder prediction 439 465 - -
Glsi09g1579 472 CDD Bbox1_BBX-like 47 90 - -
Glsi09g1579 472 ProSiteProfiles Zinc finger B-box type profile. 86 130 IPR000315 GO:0008270
Glsi09g1579 472 MobiDBLite consensus disorder prediction 439 472 - -
Glsi09g1579 472 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 45 447 - -
Glsi09g1579 472 SMART bboxneu5 43 90 IPR000315 GO:0008270
Glsi09g1579 472 SMART bboxneu5 91 130 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1579 Glsi-ChrGlsi09 12399884 12407315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1579 44 373 C2C2-CO-like Transcription Factor Family AT1G68190 40.841 6.61e-69 222