Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1573 ATGGAGGCGCCAGCTACCACTACGCCACTTTCTTCCGCCGTTGTGCCGCCGCCCCATCTTAACTACCCAGACTCAGTTGACTCCTCTCCTCGTTCCCGAAACACCGATTCCTGGGATGACCCTCCCCCTTTTCCGGCCGCCGCCTCCAATAATCTCCGCCTCATGTGCAGCTACGGCGGTCACATCGTTCCCCGCCCCCACGACAAGTCCCTTTGTTATGTCGGTGGCGAAACTCGTATTGTTGTTGTTGAACGCCACACATCCCTCTCCGACCTCTCCTCACGCCTCTCCAAAACCTTCCTCAACGACCGTCCATTCACTCTCAAATACCTGCTTCCCAGTGAAGACCTCGATTCCCTTATCTCAGTAACCACCGATGAAGACCTTGAGAACATGATCGAGGAGTACGATCGAATTTTTGGGAACCCGTCAGTGAAACCCTCTAGAATCCGCCTTTTCCTGTTCCCGGTGAAACCCGATTCGGCCCAATCGATACCCATCATTAATAGTTCGGCGAAGTCAGATGATTGGTTTATGGGCATGCTTAATAGAGGGTTCTCGGACTCTGGGTCCGTTAATTTGTTGATGGGTTTTGATGATGAGGTTGTTGCTAGCAATCTGGATTCGGGTTCTAAAGATATGGAGGCTGCGAATTCTGGATCTTTTGGGAATGGCAAGAGTTTGAAGCAGCAGGGGCAGGATGTTCAGTCGGTGCCCGATTCACCTATGCTGGAAACCACGTCGTCTTTTGGGTCCACTTCTTCATCGCCTTCGGTGGCAAATTTGCCGCCGATTCGGGTTCATGTTGATGATGGCAGTGGTGGTGGAGCCAGGGTGCAGGATCAGAAGGTGGTGGGGATCGAGGAACAGTTTGCTCAAATGGGTGTTGGTGGCGGGCAGAAGCAAGATGAGGGTTTCGTTCTGTCTTCGCCTCCTCCTATGCCGGCGTCCACCATTTCGGCTGCGCCTGGTGTGCCGATCAGCTCATCAGTGGCTGCTGGTGAATACCAGAATCGTGTTGTCTCCGATGATGAGAGATCAGACCATGCGGTGCCCGTGGGATATAGAAAACATCCCACACCGCAGCCACAGACGCTTCCACAGCCTCAATTTCAACAGAAGTCGGCTGGGGGTGTTGATTTGCCTTCCCCAGATTCAGTTTCAAGTGACAGTAGTTTTACGAATGCAGTGTCCCGTCCAAAACCTGTGGTTTATCAAGACCAAGTTCAAGTCCAAATTCCCTCTGGAACTTCAAGGGTTCCTAGCAACCCTGTTGATCCAAAACTTAATATGTCCGATCCACATGGTCGGATCCAGATGCAGCAACAAGTACAGGATCAGGCATATGTATTGCAACGGCAATTCGATCACCAACAGCAACAACAGCAATTCGATCAGCAACAGCAACGACAGCAATTTGATCAGCAACAGCAACAACAGCAATTTGATCAGCAACAGCAACAGCAGCAATTTGATCACCAACAGCAACAACAGCTATTTGATCACCAACAGCAACAACAGCAGCAGCAATTTATACATAGCAAGCAGCAACAAGTACAGGATCAGGGGTATGTATTGCAGCAACAATTCGATCAACAACAGCAGCAGCAATTTATACATAGCATGCAGCAACAAGCACAGGATCCGGGATATGTATTGCAACAACAATTTGATCAACAACAACAACAACAATCTCAGCAGCAGCAATTTATACATGGCACACATTTCATTCAACATACGCCTTCTGGGCCTGTGCAGATCCCTGCATACTATCCTGTATATCCTTCCCAGCAGCAGCTCCATCCCCAGCATCATCATCAGCTTGATCAGCAATACCAGATTTACTATGTGCCTGCAAGACAGACCCAACCTTACAACTTGTCTGTGCAGCAACCTAATATTAGTGAATCTGCCACAACCATCCCCTCTAGCCGCTCCCAAACACCACCAAATCCTGCAATAGTTCAACCATCTTCAGCTTACAACCCCGTAAGAAGTGCTCCTGGGCCTAAATCTGAAATGGCAGCGGGTGCGTACAGAACAGCAATTACAGGCGCCCCTCAATTAGTTCAAGTTCCTTCTAGTCAGCCTCAGCAACAATTTGTTGCCTACTCCCAATATCATCATTCGGCTCAGTCCGTTGCCCCCAATCCTGCTGCCCCTGCTAGTTATGCTTATGACTATGCCGATCCTGCTCATGCCCAAATATACTACACACAACCTCTGGCACCCACAATGCCTTCACAGTACCAAACTATGACAGGTGCTGCTGTACTTCCAGATGCTTCTGCTCAGCCTCCCTCAGACAGCATGAAGCAGCAAATAAGAACCTCCCAGCCATTATAA 2346 0.4957 MEAPATTTPLSSAVVPPPHLNYPDSVDSSPRSRNTDSWDDPPPFPAAASNNLRLMCSYGGHIVPRPHDKSLCYVGGETRIVVVERHTSLSDLSSRLSKTFLNDRPFTLKYLLPSEDLDSLISVTTDEDLENMIEEYDRIFGNPSVKPSRIRLFLFPVKPDSAQSIPIINSSAKSDDWFMGMLNRGFSDSGSVNLLMGFDDEVVASNLDSGSKDMEAANSGSFGNGKSLKQQGQDVQSVPDSPMLETTSSFGSTSSSPSVANLPPIRVHVDDGSGGGARVQDQKVVGIEEQFAQMGVGGGQKQDEGFVLSSPPPMPASTISAAPGVPISSSVAAGEYQNRVVSDDERSDHAVPVGYRKHPTPQPQTLPQPQFQQKSAGGVDLPSPDSVSSDSSFTNAVSRPKPVVYQDQVQVQIPSGTSRVPSNPVDPKLNMSDPHGRIQMQQQVQDQAYVLQRQFDHQQQQQQFDQQQQRQQFDQQQQQQQFDQQQQQQQFDHQQQQQLFDHQQQQQQQQFIHSKQQQVQDQGYVLQQQFDQQQQQQFIHSMQQQAQDPGYVLQQQFDQQQQQQSQQQQFIHGTHFIQHTPSGPVQIPAYYPVYPSQQQLHPQHHHQLDQQYQIYYVPARQTQPYNLSVQQPNISESATTIPSSRSQTPPNPAIVQPSSAYNPVRSAPGPKSEMAAGAYRTAITGAPQLVQVPSSQPQQQFVAYSQYHHSAQSVAPNPAAPASYAYDYADPAHAQIYYTQPLAPTMPSQYQTMTGAAVLPDASAQPPSDSMKQQIRTSQPL 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1573 781 ProSiteProfiles PB1 domain profile. 51 157 IPR000270 GO:0005515
Glsi09g1573 781 PANTHER OS05G0427100 PROTEIN-RELATED 21 491 - -
Glsi09g1573 781 CDD PB1_UP2 55 155 - -
Glsi09g1573 781 MobiDBLite consensus disorder prediction 636 672 - -
Glsi09g1573 781 MobiDBLite consensus disorder prediction 408 425 - -
Glsi09g1573 781 MobiDBLite consensus disorder prediction 210 278 - -
Glsi09g1573 781 MobiDBLite consensus disorder prediction 636 665 - -
Glsi09g1573 781 MobiDBLite consensus disorder prediction 1 44 - -
Glsi09g1573 781 Pfam PB1 domain 67 156 IPR000270 GO:0005515
Glsi09g1573 781 SMART PB1_new 66 157 IPR000270 GO:0005515
Glsi09g1573 781 MobiDBLite consensus disorder prediction 211 261 - -
Glsi09g1573 781 SUPERFAMILY CAD & PB1 domains 67 164 - -
Glsi09g1573 781 MobiDBLite consensus disorder prediction 461 507 - -
Glsi09g1573 781 MobiDBLite consensus disorder prediction 340 434 - -
Glsi09g1573 781 MobiDBLite consensus disorder prediction 766 781 - -
Glsi09g1573 781 Gene3D - 71 156 - -
Glsi09g1573 781 MobiDBLite consensus disorder prediction 757 781 - -
Glsi09g1573 781 MobiDBLite consensus disorder prediction 367 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1573 Glsi-ChrGlsi09 12352181 12354679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1573 52 156 MAP Kinase Kinase Kinase AT1G04700 50.000 3.22e-24 107