Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1570 ATGACGGACGCTTGCATCCGAGCCGTTGTAGAAGCCATACACTCAAGCCCATTTCAGGCCGTCATCTATCTCTCCGGTGGAGCCTCTCAGGTCATAAGTTCGTTGCTTTCAGTGCCTGGGGCCTCACACACATTGCTTGAAGCTGTGGTTCCTTACTCCAGGATGTCCATGATCCAGTTATTTGGCAAGATTCCAACTCAGTTTTGTACCGAACCGATTACTGAAGAGATGGCTTTGTTGGCTTATAATCGTGCTCTTAAGCTTTCCAAACCAGGATTCCCAGTTCTGGGTGTGGGTTTCACTGGTTCTTTGGCTACTACACGTCCAAAACGTGGGGAGCATAGATTTTATATGTCAACAAGAACAGCAGATCGACTTTGGGTATCAACAGTTACCTTGACCAAGGGGTTGCGAACTCGAGAAGAAGAGGAAAGAGTTTCTAATCATCTTTTACTCAAGGCAATTGCAAACGCATGCAGAGTTCCAGCAACATCTGTTTCTGAGTTGATTGAATTTGATGTATCTGAAGAATGTGAAAAGCAATTCAATGAAGATCAAGAATTAGAACAACTAATAAACGGTCAAATATGCTTTAAAATGTATCCATTTTCAAGTGGCATGGTCAAACCTTTCATAACATTTAATCTTAACATTTGTGGTGATGGGTATCCATGCTTTGAAATATCTGCAGTCAATGCGGACAAACCTCCATTATCAGTGCCTCAAATCAAGGATCGTGTCAAGCAGTTTGAAAAAGTTGTTCCACCTGCTCTTTATCTTCCTTTGTGTTCTGGATTTGCTCCAACGGTCACTAAGTTGGAGATGCTTCCTTTGGTTTTGTGGGTTTTTCTTCTCTCCAACTCTCTTGCTCCTGCGACTTCTCTAAATGCCGAAGGCTCTGCGCTTTTGGCTCTTAAGCAGTCCCTCAAAGACTCACAAGGTTCTATGAGCAACTGGAATTCTTCTGATGAAAACCCCTGTTCGTGGAATGGGATTACATGCAAGGAACAGAGTGTTGTGTCCATCAGTATTCCCAAGAGGAAGCTTTATGGGTTTCTACCTTCTTCCCTAGGATCTCTTTCCCAGCTCCGCCATGTAAATTTCAGGAACAATAAGCTCTGGGGGAGCTTACCCACAGAGCTATTCCAAGCACAGGGATTACAAAGTTTGGTCCTTTATGGCAATTCCTTTTCTGGGTCTATTCCAAAAGAGATTGGGAAGCTCAGGTACCTTCAAACTCTAGATTTATCACAAAACTTATTCAATGGGTCTTTACCTTCTACAATTGTTCAATGCAAGAGACTCAAAACCCTTGTTCTTAGTCAAAACAATTTCACTGGTCCTCTTCCAGATCGGTTTGGTACTGATTTATTTTCTCTGGAAAAACTCGACCTTTCTTTCAATTATTTCAATGGTTCAATTCCTAGGGACATGGGAAATCTATCTAGCCTGCAAGGAACTGTTGATTTATCGCATAATCATTTTTCTGGTTCAATCCCGCCCAGCCTTGGTAATTTACCTGAGAAAGTTTATATTGATCTTACTTACAATAATTTAAGTGGGCCAATACCACAAAATGGTGCTTTAATGAACAGAGGACCAACAGCTTTTATTGGTAACCCTGGTCTCTGTGGCCCTCCATTGAAGAATCTATGTTCCTCAGATACACCTGGCGCTAGCTCACCTTCCTCATTTCCATTTCTTCCAGACAATTACCCACCTCAGGGTCAGTATAACGGTTTTGGGAAAGCTGAGAAAACTAAGGGGTTAAGTAAGGGTGCTATTATTGGCATTGTTGTGGGTGATATTATTGGAATTTGCCTTTTGGGTTTGCTATTCTCTTACTTCTACTCTAGGGTTTGTGGTCTTAACCAGGACAACGATGAGACTGGTTTTGAGAAGGGAGGGAGAGGGGGGAAAGAGTGCTTGTGCTTCAGAAAGGATGAATCTGAGACCCTGTCTGACAATGTCGAGCAATATGATCTTGTCCCATTAGATACCCAAGTGGCCTTTGATTTGGATGAGCTTCTTAAGGCTTCGGCTTTTGTTCTGGGAAAGAGTGGAATAGGCATTGTCTACAAAGTGGTGCTTGAAGATGGTCTTACCTTAGCCGTGAGACGATTGGGGGAAGGTGGTTCTCAAAGGTTTAAAGAATTCCAGACTGAAGTTGAAGCAATAGGAAGATTAAGGCATCCTAACATTGTTACTCTTAGGGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATCTATGATTACATACCCAATGGAAGCCTTGCTTCGGCAATTCATGGGAAGGCTGGAATGGTCACATTCACGCCACTATCTTGGTCAATTCGACTGAAAATCATGAAAGGGATTGCGAAAGGATTGGTCTACCTGCACGAGTTTAGCCCCAAAAAATATGTCCATGGAGATCTGAAGCCAAATAACATACTGCTAGGGCATAACATGGAACCCCATATTTCTGATTTTGGACTCGGAAGACTTGCAAACATTGCTGGAGGCTCTCCAACTTTGCAATCAAACCGAGTTGCTGCTGAAAAACCCCATGAAAGGCAAAAGAGTTTATCTGCAGCAGAAGTTACAGCTAATATTCTGGGAACTTGTTATCAGGCTCCAGAAGCATTGAAAGTGGTGAAGCCATCACAGAAATGGGATGTTTATTCATTTGGTGTGATTTTGCTGGAAATGATCACAGGAAGATTGCCCATTGTCCAAGTGGGGAACTCCGAAATGGACCTTGTCCAATGGATTCAGTTCTGCATTGAGGAGAAGAAACCACTATCAGATGTGTTAGACCCATATTTACCAGAAGATCCAGATAGGGAAGAGGAGATTATTGCAGTTTTGAAGATTGCAATGGCTTGTGTTCATAGTAGCCCCGAAAAGAGACCGACAATGAGGCATGTGCTGGATGCATTGGATAGGTTGTCCTTGTCCCTTTCCTCCGATTGA 2958 0.428 MTDACIRAVVEAIHSSPFQAVIYLSGGASQVISSLLSVPGASHTLLEAVVPYSRMSMIQLFGKIPTQFCTEPITEEMALLAYNRALKLSKPGFPVLGVGFTGSLATTRPKRGEHRFYMSTRTADRLWVSTVTLTKGLRTREEEERVSNHLLLKAIANACRVPATSVSELIEFDVSEECEKQFNEDQELEQLINGQICFKMYPFSSGMVKPFITFNLNICGDGYPCFEISAVNADKPPLSVPQIKDRVKQFEKVVPPALYLPLCSGFAPTVTKLEMLPLVLWVFLLSNSLAPATSLNAEGSALLALKQSLKDSQGSMSNWNSSDENPCSWNGITCKEQSVVSISIPKRKLYGFLPSSLGSLSQLRHVNFRNNKLWGSLPTELFQAQGLQSLVLYGNSFSGSIPKEIGKLRYLQTLDLSQNLFNGSLPSTIVQCKRLKTLVLSQNNFTGPLPDRFGTDLFSLEKLDLSFNYFNGSIPRDMGNLSSLQGTVDLSHNHFSGSIPPSLGNLPEKVYIDLTYNNLSGPIPQNGALMNRGPTAFIGNPGLCGPPLKNLCSSDTPGASSPSSFPFLPDNYPPQGQYNGFGKAEKTKGLSKGAIIGIVVGDIIGICLLGLLFSYFYSRVCGLNQDNDETGFEKGGRGGKECLCFRKDESETLSDNVEQYDLVPLDTQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRFKEFQTEVEAIGRLRHPNIVTLRAYYWSVDEKLLIYDYIPNGSLASAIHGKAGMVTFTPLSWSIRLKIMKGIAKGLVYLHEFSPKKYVHGDLKPNNILLGHNMEPHISDFGLGRLANIAGGSPTLQSNRVAAEKPHERQKSLSAAEVTANILGTCYQAPEALKVVKPSQKWDVYSFGVILLEMITGRLPIVQVGNSEMDLVQWIQFCIEEKKPLSDVLDPYLPEDPDREEEIIAVLKIAMACVHSSPEKRPTMRHVLDALDRLSLSLSSD 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1570 985 SMART serkin_6 683 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1570 985 SUPERFAMILY Protein kinase-like (PK-like) 683 975 IPR011009 -
Glsi09g1570 985 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 295 455 - -
Glsi09g1570 985 CDD STKc_IRAK 684 972 - -
Glsi09g1570 985 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672|GO:0006468
Glsi09g1570 985 ProSiteProfiles Protein kinase domain profile. 678 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1570 985 Gene3D Ribonuclease Inhibitor 287 348 IPR032675 -
Glsi09g1570 985 Gene3D Ribonuclease Inhibitor 349 555 IPR032675 -
Glsi09g1570 985 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 342 977 - -
Glsi09g1570 985 SMART LRR_typ_2 457 481 IPR003591 -
Glsi09g1570 985 SMART LRR_typ_2 360 384 IPR003591 -
Glsi09g1570 985 SMART LRR_typ_2 408 432 IPR003591 -
Glsi09g1570 985 Gene3D Phosphorylase Kinase; domain 1 647 753 - -
Glsi09g1570 985 Gene3D Transferase(Phosphotransferase) domain 1 754 983 - -
Glsi09g1570 985 FunFam Leucine-rich repeat receptor-like protein kinase 661 753 - -
Glsi09g1570 985 FunFam Leucine-rich repeat protein kinase family protein 754 981 - -
Glsi09g1570 985 Pfam Protein kinase domain 684 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1570 985 Pfam Leucine rich repeat N-terminal domain 296 334 IPR013210 -
Glsi09g1570 985 FunFam Leucine-rich repeat receptor-like protein kinase 459 554 - -
Glsi09g1570 985 SUPERFAMILY L domain-like 296 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1570 Glsi-ChrGlsi09 12313543 12325743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1570 278 981 Receptor kinase-like Gene Family AT2G01210 68.908 0.0 994
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi09g1570 Pkinase 3.4e-34 CL0016