Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1559 ATGGCTCCAGATTCTCTGCTTCGTTCCTTCCTCCTGTGTTATTTTCTTCTTCTTCTATCATCTGCAAAAGCACATAATTACCTTGAAGAGGAAGACTGTCCAAAACCCTTTCGCTGTGGGAATTTTGGGCAAATTCATTTCCCCTTCACCAATACACCGAGACCAGAATGTGGTTTTCCCATATGGGGTTGTGATGATCTAAAGTCAGACAAAGTCCTATTGGGAAACCAAAGTTGGTTCAAAATTATAAGGATATATCAGAAGGAGGATTACAATGAAATCATCATCCAAGCCGATGAGTTACAGGAGATCTTGTCCTCCAAATTTTGCAGTGCCTTCGACCATACTCACACTATGCCTCCAGCGTCTCCTATGATGTCTTCTTCAGTCATAGACTCTATTACCCTCTTCAGATGCGACCGCAACGTCATGAACAATGTCCGTTTAGCTATTGGATGTGGATTCGTAATTGTGATTGGCTTATTTATTATTCTACTGCTAAGATACACTATTTCGGGCTTCCTAAACCAGTCAAGAAACATTTATTTTGATATCAAATCAAGTACAAGCCCAGAATGTATTGCTGCCAATTTCAGGGTCCCTGTCTTCTCCTATGAGGTACTGGAAGAAATAACAAACAATTTTGATCCATCTAGAGAACTTGGAAATGGAGGTTTTGGGACGGTTTACTACGGAAAACTTCAAGATGGACGGGAAGTTGCCATCAAGCGCCTACACAAGCGCAAGCGTGACAACAGGCATGTAAAACAGTTTATGAACGAAATTCAAATCCTCACAGGCTTGCGCCATAGAAATCTTTTCGGTTTTGTAGAAGTTGTTTCGGTGCAATTGTTTGGTCTGGTCTTCAACTTGTCTGGAATCATTTACATATCCGAGTCACAAAGTGTTCAACATCTGGAGCGTGAACAACCACCTTCACTTTCATATCTTTTATCTTCTCCAAAACCGGGACTGTTTCTTGGTGTTTTGGGTGGAAAAGCATTTGTAAAGGGTGCACCTCCTGATTCTCCAAAAGTTGTCTCAAACTTCTTAATTTTCTGCTGGGTTCAGCGAGGAATGCCAGTTGCTTGGCTTCATCTGCCTTCCATGACTTAA 1116 0.4149 MAPDSLLRSFLLCYFLLLLSSAKAHNYLEEEDCPKPFRCGNFGQIHFPFTNTPRPECGFPIWGCDDLKSDKVLLGNQSWFKIIRIYQKEDYNEIIIQADELQEILSSKFCSAFDHTHTMPPASPMMSSSVIDSITLFRCDRNVMNNVRLAIGCGFVIVIGLFIILLLRYTISGFLNQSRNIYFDIKSSTSPECIAANFRVPVFSYEVLEEITNNFDPSRELGNGGFGTVYYGKLQDGREVAIKRLHKRKRDNRHVKQFMNEIQILTGLRHRNLFGFVEVVSVQLFGLVFNLSGIIYISESQSVQHLEREQPPSLSYLLSSPKPGLFLGVLGGKAFVKGAPPDSPKVVSNFLIFCWVQRGMPVAWLHLPSMT 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1559 371 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 147 IPR044652 GO:0004672
Glsi09g1559 371 Pfam Protein kinase domain 218 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1559 371 ProSiteProfiles Protein kinase domain profile. 215 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1559 371 ProSitePatterns Protein kinases ATP-binding region signature. 221 243 IPR017441 GO:0005524
Glsi09g1559 371 Gene3D Phosphorylase Kinase; domain 1 183 288 - -
Glsi09g1559 371 SUPERFAMILY Protein kinase-like (PK-like) 187 282 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1559 Glsi-ChrGlsi09 12188077 12192245 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1559 142 339 Receptor kinase-like Gene Family AT1G25390 34.466 4.39e-26 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Glsi09g1559 Pkinase 9.4e-11 CL0016