Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1558 ATGAACGGTGTCCCTAAATACTTCGTCAATTTTACAGATTGTCCTGATATCTACTTCAATCCTAACAGAACAGTTGACAAGTTGCCCAGCTCTTTATATGCATGTTCTACTATCCAGCTTTCATTTAAAAATCCACCTCCTGGCCATTCCTTCAAGGCCGACCTATTTGCATACTTAAGTGCTCTAACCCATATAGCAGTAGAAGTATCTGAGTCTTGTCATGATTGTTATTATAGAAGAGGAGGGCAATGTATAGCTGAAGGGGATTTGTGTCTTGTCCACGTTTTCCATCTTGTTGATACCAGAGCACAAGGGAAAGTTTCCAAAGGCTACAAAAATAGGTTTAGGAGTGGGAAGCGCAGTCGCAATTACAATTGTCCTGTTAGTCATTCTAGTGGTGAAAATACCAAGGTCCCTGTCTTCTCCTATGAGGTACTGGAAGAAATAACAAACAATTTTGATCCATCTAGAGAACTTGGAAATGGAGGTTTTGGGACGGTTTACTACGGAAAACTTCAAGATGGACGGGAAGTTGCCATCAAGCGCCTACACAAGCGCAAGCGTGACAACAGGCATGTAAAACAGTTTATGAACGAAATTCAAATCCTCACAGGCTTGCGCCATAGAAATCTTGTGACTCTCTTTGGATGCACTTCACGTCACAGCCGCGGGCTACTAAAGAAATCTAACTTTATGATTGGGTCTGTTCCCTTACAATTCGGTTTTCTAGGAGTTGTTTCAGAAAAGAGAAACGAAAACACGGTGTCCTCATTTAGCGACGCTGAAGTTGTGGAGTGTGACTCGGGATTAATTGGCTTATCGGAGGGCATGTTTTAA 837 0.4205 MNGVPKYFVNFTDCPDIYFNPNRTVDKLPSSLYACSTIQLSFKNPPPGHSFKADLFAYLSALTHIAVEVSESCHDCYYRRGGQCIAEGDLCLVHVFHLVDTRAQGKVSKGYKNRFRSGKRSRNYNCPVSHSSGENTKVPVFSYEVLEEITNNFDPSRELGNGGFGTVYYGKLQDGREVAIKRLHKRKRDNRHVKQFMNEIQILTGLRHRNLVTLFGCTSRHSRGLLKKSNFMIGSVPLQFGFLGVVSEKRNENTVSSFSDAEVVECDSGLIGLSEGMF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1558 278 Gene3D Phosphorylase Kinase; domain 1 127 226 - -
Glsi09g1558 278 Pfam Protein kinase domain 156 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1558 278 SUPERFAMILY Protein kinase-like (PK-like) 122 221 IPR011009 -
Glsi09g1558 278 ProSitePatterns Protein kinases ATP-binding region signature. 159 181 IPR017441 GO:0005524
Glsi09g1558 278 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 25 226 IPR044652 GO:0004672
Glsi09g1558 278 ProSiteProfiles Protein kinase domain profile. 153 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1558 Glsi-ChrGlsi09 12178849 12184523 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1558 137 232 Receptor kinase-like Gene Family AT1G25390 59.375 6.60e-31 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Glsi09g1558 Pkinase 7e-13 CL0016