Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1556 ATGCCTTCACCTTACACTCTGAGTCTTTTGGAGCTCAATTCTCAATTATTTTTCACCTTGTTGATACCAGAGGACAAGACAAAGGTACCAGAGCACAAGACAAAGAATTCGAAGGCTATAAAAATAGGTTTAGCTATTGGATGCGGATTCATTATTGTGATTGGCTTATTTATTATTCTACTGCTGAAGGAACTAAGATACACTTGTTCGGGCTTCCTAAACCAGTCAAGAAACATTTATTTTGATATCAAATCAAGTACAAGCGCAGAATGTGTTGCTGTCAATTTTAGGGTCCCTGTCTTCTCCTATGAGGTACTGGAAGAAATAACAAACAATTTTGATCCATCTAGAGAACTTGGAAATGGAGGTTTTGGGACGGTTTATTACGGAAAACTTCAAGATGGACGGGAAGTTGCCATCAAGCGCCTACACAAGCGCAAGCGTGACAACAGGCATGTAAAAATGTTTATGAACGAAATTCAAATCCTCACAGGCTTGCGCCATAGAAATCTTAGTCGCCCCCATAATTTTTGTGTGGATCATGCTCAGCGCCAGGGTTGTGACGAGGAGGTCTGGAATCATTTACATTTACCTGAGTCACAAAGTGTTCAACATCTGGAGCGTGAACAACCACCTTTGCTTTCATATCTTTCATCTTCTCCAAACCCAGGACTGTTTCCTGGTGTTTTGGATGGAAAAGCATTTGTAAAAGGTGCAGCGAGGAATGCCGGTTGCTTGGCTTCATCTGCCTTCCATGACTTAAAACAACTGCATCGCATGCGAGTAGTTGGAGAAAAACAGCACAATATTTGA 813 0.4133 MPSPYTLSLLELNSQLFFTLLIPEDKTKVPEHKTKNSKAIKIGLAIGCGFIIVIGLFIILLLKELRYTCSGFLNQSRNIYFDIKSSTSAECVAVNFRVPVFSYEVLEEITNNFDPSRELGNGGFGTVYYGKLQDGREVAIKRLHKRKRDNRHVKMFMNEIQILTGLRHRNLSRPHNFCVDHAQRQGCDEEVWNHLHLPESQSVQHLEREQPPLLSYLSSSPNPGLFPGVLDGKAFVKGAARNAGCLASSAFHDLKQLHRMRVVGEKQHNI 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1556 270 SUPERFAMILY Protein kinase-like (PK-like) 85 182 IPR011009 -
Glsi09g1556 270 ProSitePatterns Protein kinases ATP-binding region signature. 119 141 IPR017441 GO:0005524
Glsi09g1556 270 ProSiteProfiles Protein kinase domain profile. 113 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1556 270 Gene3D Phosphorylase Kinase; domain 1 81 185 - -
Glsi09g1556 270 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 38 210 IPR044652 GO:0004672
Glsi09g1556 270 Pfam Protein kinase domain 116 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1556 Glsi-ChrGlsi09 12132471 12143748 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1556 40 220 Receptor kinase-like Gene Family AT1G25390 37.017 7.69e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Glsi09g1556 Pkinase 1.1e-10 CL0016