Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1553 ATGGAGGGCCGTTCTAGGGGATCATATGGGCACAAGTTTTTTGGGGTTCAAGAGGATGCTGACATCGCTCTAAACCTTGATAGTTCATTGTCTGATGAGTCCAAGGAAGTAGTTTCAGATGATAGTTCTGATAAGTCTCAATTGAGTCAGATGATTTGCAGTCTGGAGAACAGGCTCCTAACTGTGAAGCTCCTTGGGAAGAAGGCGGGGTTGGATTTTATGAAGGCTAGGTTGGTTGGAGAAAATGTGGAAGCTGCAGGGCTCAATCTAGATTTGAAATTTCAATGATGTGCTTATGCGCTTGCAAAGACGGATCATTCCTTGCACTTGGGATTGCAGGTTTTTCACAGTCCCCCCACTGCTCTTGTTAGTCTTCTGTTTGATGATCGACAAAGGTACAATTGTCCATGCCTCCTAAACCAATCAAAAAACATTTATTTTGACGTCGAGCCAGATACAAGCCCAAGATGTGTGACTGTCGATTTTGGAGCCCCTATCTTCTCCTGTGAGGAACTGGAAGAAGCAACAAACCATTTTGATCCACTTAGAGAACTTGGAAACGGAGGCTTTGGGACTGTCTACTACGGAAAACTTAAAGACGGACGAGAAGTTGCCGTCAAGCGTCTGTATGAGCATAAGCATAACCAAAAGCGTGAAAAGCAGTTCATGAATGAAGTTCAAATCCTCACACGCCTGCTCCATAGAAATCTTAAAATCAAGCTCCTCGCTATTCGAAGCGGCGTGGCTCAGAGCGCCCCCCCCCCCCCTAACGGGAAGCCCGAGGACAAGCCCGCTGGTTCAGCTCCAGCGCTGGAAAACCACCCTACGGATGCTGCTGAGCCTGGGCAATGGTTGCCGTCATCACCTCGCCCATGGGTATCACACTGA 888 0.4775 MEGRSRGSYGHKFFGVQEDADIALNLDSSLSDESKEVVSDDSSDKSQLSQMICSLENRLLTVKLLGKKAGLDFMKARLVGENVEAAGLNLDLKFQXCAYALAKTDHSLHLGLQVFHSPPTALVSLLFDDRQRYNCPCLLNQSKNIYFDVEPDTSPRCVTVDFGAPIFSCEELEEATNHFDPLRELGNGGFGTVYYGKLKDGREVAVKRLYEHKHNQKREKQFMNEVQILTRLLHRNLKIKLLAIRSGVAQSAPPPPNGKPEDKPAGSAPALENHPTDAAEPGQWLPSSPRPWVSH 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1553 295 MobiDBLite consensus disorder prediction 248 295 - -
Glsi09g1553 295 ProSitePatterns Protein kinases ATP-binding region signature. 185 207 IPR017441 GO:0005524
Glsi09g1553 295 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 158 237 IPR044652 GO:0004672
Glsi09g1553 295 Gene3D Phosphorylase Kinase; domain 1 152 247 - -
Glsi09g1553 295 SUPERFAMILY Protein kinase-like (PK-like) 152 237 IPR011009 -
Glsi09g1553 295 Pfam Protein kinase domain 182 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1553 295 ProSiteProfiles Protein kinase domain profile. 179 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1553 Glsi-ChrGlsi09 12109990 12112803 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1553 160 237 Receptor kinase-like Gene Family AT1G25390 66.667 2.00e-26 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Glsi09g1553 Pkinase 1.1e-09 CL0016