Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1551 ATGAAGCAAAAAAGCCTCTTGCCTTGCTCCTATTCTCACCATGTCAACTCATACTTCCTCTTCTCTCTCCTAACTGGAATCACCTTGTGTTCATCTCTGAATCCGAAGTTCCAAGCTTGTCAGCCCAGAAGTTGTGGTAATCTTCAAAACATAAGCTACCCTTTTTATGTTGAAGGAAGACAGGAAGCCTTTTGTGGGTTCCCTGGTTTCGCCCTTTCTTGTATCGATAATGGCTTCCCAGTTCTTAATCTCTCCGAAAACCGATATATTGTCCATCAAATTTTCTACAACAACCAGACAATTCGAATCTCCGATGCTGCGCTGAACACCACAGGTTGTCTCCGTCGGATCAACAACCTCACCCTTTACGAGAGCAGGTTCGGTCTTGCTCCGAACCAGAAGGACCTGTTCTTGGTGTTCGGCTGCAACCTAGTACCATCGTCGTCGCTTATAGAGTACCGAATAGGGTGTTCTGAAGAAAACGAAACGGACTCTGTTTTGGCAATGTATGGGGATGGGGGTGAAGAGTTGAGCTTGGCGTCGAAGAATTGTAAGGGTGGGGTGGTGAAAGCAAAAATGGGATATGGGTATGTTGAGAAAGGAAGGATTATTGAGGGATTGAGAAGAGGGTTTGTTTTGAATTGGAATGCATCGGATTGCAGCTTGTGCACGAAGACTGGAGGGCAGTGTGGGTTCGACATCGAAGCATACAATTTCAAGTGCTATTGCCCTCATAGAGATTATGCTTCGAAATGTGATCCTGAGGACAAGAGACGGCTTTCAAAGGTTTCAATGACAGGTTTAGCTATTGGATGCGGAGTTGTGATTATGATTAGCTTATTTATTATTCTACTGCTGAAGGAAGAAAGATACAATTGTTCAGGCTTCCTAAACCAATCAAGAAACGTTTATTTTGATATCAAATCAAGTACAAGCCCAGAATGTATTGCTGCCAATTTCAGGATCCCTGTCTTCTCCTATGAGATACTTGAAAAAGTAACAAACAATTTTGATCCACTTAGACAACTTGGAAACGGAGGTTCTGGGGCTGTTTACTATGGAAAACTTCCAGATGGACGGGAAGTTGCCGTCAAACGCCTATACGAGCGCAAGCGTGACAATAAGCATGTAAAACAGTTCATGAATGAAATTCAAATCCTCACACGCCTGCGCCATAGAAATCTTGTGTCTCTCTATGGATACGGGGATACACATTCAAGGGACGATGAGCTACAAATTCTCCTGGCAGTGCCCTCTTCTCGGTACTATATTTTTCTTCGTCCAAGGGACGAAGAAGGCCTTTGA 1305 0.4383 MKQKSLLPCSYSHHVNSYFLFSLLTGITLCSSLNPKFQACQPRSCGNLQNISYPFYVEGRQEAFCGFPGFALSCIDNGFPVLNLSENRYIVHQIFYNNQTIRISDAALNTTGCLRRINNLTLYESRFGLAPNQKDLFLVFGCNLVPSSSLIEYRIGCSEENETDSVLAMYGDGGEELSLASKNCKGGVVKAKMGYGYVEKGRIIEGLRRGFVLNWNASDCSLCTKTGGQCGFDIEAYNFKCYCPHRDYASKCDPEDKRRLSKVSMTGLAIGCGVVIMISLFIILLLKEERYNCSGFLNQSRNVYFDIKSSTSPECIAANFRIPVFSYEILEKVTNNFDPLRQLGNGGSGAVYYGKLPDGREVAVKRLYERKRDNKHVKQFMNEIQILTRLRHRNLVSLYGYGDTHSRDDELQILLAVPSSRYYIFLRPRDEEGL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1551 434 Pfam Protein kinase domain 340 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1551 434 Gene3D Phosphorylase Kinase; domain 1 305 413 - -
Glsi09g1551 434 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Glsi09g1551 434 ProSiteProfiles Protein kinase domain profile. 337 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1551 434 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 19 409 IPR044652 GO:0004672
Glsi09g1551 434 Pfam Wall-associated receptor kinase C-terminal 198 245 IPR032872 -
Glsi09g1551 434 SUPERFAMILY Protein kinase-like (PK-like) 323 406 IPR011009 -
Glsi09g1551 434 Pfam Wall-associated receptor kinase galacturonan-binding 40 105 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1551 Glsi-ChrGlsi09 12098706 12104063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1551 36 408 Receptor kinase-like Gene Family AT1G25390 30.526 1.77e-29 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Glsi09g1551 Pkinase 2.3e-11 CL0016