Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1550 ATGAAGAGGAAAACTGTCCAAAGTCCTTTCACTGTGGGAATCTTGGGGAAATTCACTTCCCCTTCACTAGCACAACGAGACCAGAACGCGGTTTTCCCATTATGGGTTGTGATGATCCAAAGTCAGACAAAGAAGTCTTATTGGGAAACTAAAGATGGTTTAGATATTGAATGCGGAGTCATAATTACAATTGCTTTATTTATTATTCTACTGCTGAAGGAAGAAAGATACAATTGTTCAGGCTTCCTAAACCAATCAAGAAACATTTATTTTGATATCAAATCTAGTACAACCCAGAAGAAGGTACTGAAGAAGGTAACAAACAACTTTGAACCATTTAAGGGACTTGGAAACGGAGGCTTTGGGACTGTTTACTACGGAAAACTTCAAGATGGATGGGAAGTTGCCGTCAAACGCCTATACAGGCGCAAGCATGACAATAAGCATGTAAAACAGTTCAGGAATGAAATTCAAATCCTCCCATGCCTACGCCTGAGAAATCTTGTGTCTCTCTGTTGA 519 0.3969 MKRKTVQSPFTVGILGKFTSPSLAQRDQNAVFPLWVVMIQSQTKKSYWETKDGLDIECGVIITIALFIILLLKEERYNCSGFLNQSRNIYFDIKSSTTQKKVLKKVTNNFEPFKGLGNGGFGTVYYGKLQDGWEVAVKRLYRRKHDNKHVKQFRNEIQILPCLRLRNLVSLC 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1550 172 Pfam Protein kinase domain 112 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1550 172 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 59 171 IPR044652 GO:0004672
Glsi09g1550 172 ProSitePatterns Protein kinases ATP-binding region signature. 116 138 IPR017441 GO:0005524
Glsi09g1550 172 SUPERFAMILY Protein kinase-like (PK-like) 84 171 IPR011009 -
Glsi09g1550 172 ProSiteProfiles Protein kinase domain profile. 110 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1550 172 Gene3D Phosphorylase Kinase; domain 1 84 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1550 Glsi-ChrGlsi09 12088348 12090897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1550 60 171 Receptor kinase-like Gene Family AT1G25390 43.590 3.19e-19 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Glsi09g1550 Pkinase 6.6e-08 CL0016