Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1548 ATGAGCAGCAATGGCCAATCTTCCGGTGGTAGTCAGAATGCCAGAGACTTAATTTTGAACGCTGGTTCTGGTGCCGCAGCTGGGGCAATAGCGGCTACATTTGTGTGCCCATTGGATGTGATCAAGACTAGACTACAAGTTCATGGTCTTCCCTCTGGACAGAAAGGTAGTGTCATTGTCACGAGCTTGCAGAATATAGTAAGGACGGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCACCAACAATACTAGCTTTACTTCCAAACTGGGCAGTTTACTTCACAGTTTATGAGCAACTAAAAGGCCTGCTACGTTCACATGGTGGTTGCGACCAACTCACAACTGTTGGAAATATGATAGCTGCTGCCGGGGCTGGGGCGGCCACCGCAATTTCAACAAATCCATTGTGGGTTGTTAAGACCAGACTCCAAACACAGGGAATGAGGCCTGATGTTGTTCCTTATAAAAGTGTTCTTTCTGCTTTGACAAGGATTATCCATGAGGAAGGCATGCGAGGACTATATAGTGGCATTGTGCCTTCATTGGCCGGCGTTAGTCATGTTGCGATACAATTCCCGGCATATGAAAAGATCAAGTCATACATGGCAAAAAAGGATAACACGACAGTTGACAAGCTAAGTCCAGGAAATGTTGCCATAGCATCTTCAATTGCGAAAGTAATTGCCTCTGTAATGACTTATCCTCATGAGGTGATACGTTCCCGGCTGCAGGAGCAAGGCCAGGCCAGAAATATTAAGGTCAAATATGCTGGGGTTATTGATTGTACTAGGAAGGTGTTCCAGAAGGAAGGCCTTCCCGGATTTTATCGCGGTTGTGCAACCAATCTATTGAGAACAACTCCATCGGCTGTTATTACATTCACCAGTTATGAGATGATATACAGGTTCTTCCACGGGTTTGTACCTCAGAACAAGGGCTATCCTCAAGGCTATTCTAAATCCAATGACCTTAACAAGCCCCAGCCAGAAGACAGTGATATAAATTTAAAAAGTGGCCCTGTGTAA 1026 0.4542 MSSNGQSSGGSQNARDLILNAGSGAAAGAIAATFVCPLDVIKTRLQVHGLPSGQKGSVIVTSLQNIVRTEGFRGMYRGLSPTILALLPNWAVYFTVYEQLKGLLRSHGGCDQLTTVGNMIAAAGAGAATAISTNPLWVVKTRLQTQGMRPDVVPYKSVLSALTRIIHEEGMRGLYSGIVPSLAGVSHVAIQFPAYEKIKSYMAKKDNTTVDKLSPGNVAIASSIAKVIASVMTYPHEVIRSRLQEQGQARNIKVKYAGVIDCTRKVFQKEGLPGFYRGCATNLLRTTPSAVITFTSYEMIYRFFHGFVPQNKGYPQGYSKSNDLNKPQPEDSDINLKSGPV 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1548 341 Gene3D Mitochondrial carrier domain 3 110 IPR023395 -
Glsi09g1548 341 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 16 304 - -
Glsi09g1548 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Glsi09g1548 341 MobiDBLite consensus disorder prediction 318 341 - -
Glsi09g1548 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Glsi09g1548 341 Pfam Mitochondrial carrier protein 213 305 IPR018108 -
Glsi09g1548 341 Pfam Mitochondrial carrier protein 112 205 IPR018108 -
Glsi09g1548 341 Pfam Mitochondrial carrier protein 20 106 IPR018108 -
Glsi09g1548 341 Gene3D Mitochondrial carrier domain 111 306 IPR023395 -
Glsi09g1548 341 MobiDBLite consensus disorder prediction 318 332 - -
Glsi09g1548 341 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Glsi09g1548 341 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Glsi09g1548 341 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Glsi09g1548 341 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Glsi09g1548 341 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Glsi09g1548 341 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 18 309 IPR044712 GO:0006862|GO:0055085
Glsi09g1548 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Glsi09g1548 341 SUPERFAMILY Mitochondrial carrier 15 299 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1548 Glsi-ChrGlsi09 12072737 12077025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1548 1 338 Chloroplast and Mitochondria Gene Families AT1G25380 67.435 3.14e-154 436