Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1547 ATGCAAACCGCCCAACGCGTGTCGTTCATATCTTGTCATCAATACGCGTTTCGTATCCGTCTTGATTATCTTTACTTCTTCTATGAATTCTTGCTTGTTGTCGCTGTCAGATCTGCATCTGGTTTTGCGCGGGACGCACATCCAGACATTCTCAAGGATCAAGATAGAAAATATACTGGTAGGCTAGATATGGCCTCTGGTGAAGGGAGGCGGCGTCATCATGGTCTTGTGCCTCTTGCTGCATTGCTAAGCAAAGAAATGAAGAGTGAGAAGATGGAGAAGCCCAATTTGAGGTATGGGCATGCTGCTCAGTCTAAGAAAGGGGAGGATTACTTTCTAATTAAGACAGACTGTCAGCGAGTACCTGGGAATCCCTCATCAACTTTTTATGTATTTGCGATCTTTGATGGACACAATGGAAATGCTGCTGCCATTTTCACTAGGGAGAAATTGTTAAATCATGTGTTGGGTGCTGTTCCTCGTGGTCTTGGACGGGATGAGTGGCTTCAAGCTTTACCTCGGGCACTGGTCTCTGGGTTTGTGAAGACTGACAAGGAATTCCAGAGCAGAGGAGAAACTTCTGGAACCACGGCCACATTTGTGATAGTTGATAGATGGACCGTGACAGTTGCATCTGTTGGTGACTCTCGTTGTATACTAGACACCCAGGGTGGAGCTGTAACAAACTTAACTGTTGATCACCGGCTTGAAGAGAATATTGAAGAGAGGGAACGTGTTACAGCCAGTGGAGGTGAAGTTGGGAGACTGAGCATTGTTGGTGGTGCAGAGATTGGTCCCCTCCGTTGCTGGCCAGGGGGTTTGTGCCTTTCTAGGTCAATAGGAGACATGGATGTTGGGGAGTTTATAGTTCCAATACCATATGTCAAACAAGTTAAGCTATCAAATGCTGGCGGGAGGCTTATAATTGCTTCTGATGGCATCTGGGATGCTTTATCCTCAGACATGGCGGCAAAATCTTGTAGGGGTTTGCCTGCTGAACTTGCTGCTAGGCAGGTTGTGAAGGAAGCATTAAGGACAAGAGGGTTAAAGGACGACACAACTTGTATAGTAGTTGACATAATTCCACCTGAAAATGCATTGCCGCCACCACCTCCCCCAAAAAAGCAGAACAAGTTGAGAGCTCTACTTTTCAGGAAGAGGTCTCGTGATGCTGTTGGCAAGCTGTCAAAGAAACTTTCAGCTGTAGATATAGTGGAAGAACTGTTTGAAGAAGGATCAGCTATGCTTGCTGAAAGACTGGGGAATGATGAAAACTCAGGGCAATCAACATCTGGCCTTTTTGTCTGTGCTGTGTGCCAAATTGATCTTGCTTCAAGTGAGGGAATATCTGTTCATGCTGGTTCCATCTTCTCCACCAGCTCAAAGCCCTGGCAGGGTCCTTTTCTATGCGCTGATTGTCGCGATAAGAAAGATGCCATGGAAGGGAAACGCCCCAGTGGAGTCAAAGTGTCATAA 1476 0.4634 MQTAQRVSFISCHQYAFRIRLDYLYFFYEFLLVVAVRSASGFARDAHPDILKDQDRKYTGRLDMASGEGRRRHHGLVPLAALLSKEMKSEKMEKPNLRYGHAAQSKKGEDYFLIKTDCQRVPGNPSSTFYVFAIFDGHNGNAAAIFTREKLLNHVLGAVPRGLGRDEWLQALPRALVSGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTNLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAARQVVKEALRTRGLKDDTTCIVVDIIPPENALPPPPPPKKQNKLRALLFRKRSRDAVGKLSKKLSAVDIVEELFEEGSAMLAERLGNDENSGQSTSGLFVCAVCQIDLASSEGISVHAGSIFSTSSKPWQGPFLCADCRDKKDAMEGKRPSGVKVS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1547 491 FunFam probable protein phosphatase 2C 5 98 365 - -
Glsi09g1547 491 SUPERFAMILY PP2C-like 93 360 IPR036457 -
Glsi09g1547 491 SMART PP2C_SIG_2 114 360 IPR001932 -
Glsi09g1547 491 PANTHER PROTEIN PHOSPHATASE 92 359 IPR015655 GO:0004722|GO:0006470
Glsi09g1547 491 SMART PP2C_4 90 358 IPR001932 -
Glsi09g1547 491 Pfam Protein phosphatase 2C 124 345 IPR001932 -
Glsi09g1547 491 CDD PP2Cc 99 360 IPR001932 -
Glsi09g1547 491 Gene3D - 98 365 IPR036457 -
Glsi09g1547 491 ProSiteProfiles PPM-type phosphatase domain profile. 91 360 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1547 Glsi-ChrGlsi09 12056197 12061462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1547 64 490 PP2C-type Phosphatase Gene Family AT1G68410 79.817 0.0 699