Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1546 ATGTGTACTGATGGTATCACTACTATTTGTCGTTCTGCAGAGACAACCAGGAAGGCTGTGCATGTAGTGGCAGCAGATGTTTATAGTTATGGAATGATGGTCTTGGAAATAGTTGGGGGAAGGAATAATATCAATATTGAAGTTGAATGTTCTAGTGAAATGTACATGGCCCATTGGATTCACAAGTGTCTTCAATCAAATGAGGACCTCAGCTTGCGATGTATTAAAAATGAAAATGACAAAGAAATGGTGAAAAAGATGATAATAGTGAGCTTATGGTGCATTCAGATTGACCCTTCAAATCGACCAACAATGTGGAAAGTGGTAGATATGATAGAAGGAAGCTTGGATTCCTTGCAAATACCTCCCTTACCAATTCTTTCGCCACTTCCCACTTCTCCATCTCATCAACAAACTCAAACAAATCATACATAG 435 0.3862 MCTDGITTICRSAETTRKAVHVVAADVYSYGMMVLEIVGGRNNINIEVECSSEMYMAHWIHKCLQSNEDLSLRCIKNENDKEMVKKMIIVSLWCIQIDPSNRPTMWKVVDMIEGSLDSLQIPPLPILSPLPTSPSHQQTQTNHT 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1546 144 Gene3D Transferase(Phosphotransferase) domain 1 4 122 - -
Glsi09g1546 144 PANTHER RUST RESISTANCE KINASE LR10-RELATED 24 135 IPR045874 GO:0004672
Glsi09g1546 144 SUPERFAMILY Protein kinase-like (PK-like) 11 138 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1546 Glsi-ChrGlsi09 12053312 12054575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1546 25 139 Receptor kinase-like Gene Family AT1G66980 44.628 1.97e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Glsi09g1546 None None None