Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1545 ATGGCGTCACCCTCTAACTTCGTTCTACGTTCTAGCTTCTTCTTCTTCTTCTTCTCCTTAACTTTTCATTTTGTTCTTCTAGTTGAATCGTCCCGAAACCCAGATTTAGAACCTCTCATGGCTTTCAAAGTCGTTTCTGATACACACAACAAGCTCACATCTTGGAACTCCAGCACCGACCCTTGTACTTGGGCCGCTGTCTCTTGCCTCAAGAACCGAGTCACGCGACTCGTTCTTGAGAACCTCGATCTCCATGGCTCTATCGAGCCCTTAACCGCTCTGACTCAGCTCCGAGTTCTGAGCCTGAAGCGAAACCGTTTTGCCGGTCACATTACGAGTCTGTCTAATTTCACAGCTTTGAAGCTTCTGTTTCTGTCTCACAATGAGTTTTCCGGTGAGTTTCCGGCGACGATTTCGTCGCTTTCCCGCTTGTACCGTCTTGATCTGTCTCACAACAACTTGTCCGGGAAGATTCCGGCGACGGTAAACCACTTGACCCACCTTCTCACTCTTCGTCTCGACGAGAACAAATTCTCCGGCCACATTCCCGTTCTAAACCTTCCCAATCTGCAAGACTTCAACGTCTCCGGGAATTTTCTCTCCGGGCAAATACCCAAACCGTTGTCGGGTTTCCCCAAATCATCTTTCTCTCAAAATCCATCTCTATGCGGAGCCCCATTGCTGGCATGTAAGAATACTGCCGTCGATCCGGGCAAACCCGGATCTGAGGGAGCTATTGCATCGCCATTGATGCCGCGAAGCAATCCTTCAATGTCTGCAAATGAAACAGCACCCAGAACATCCACCCACCACAACGGAGCTCCGAAAATGACCCGAGTAACTCTAATCGCCATCATCCTCGGCGACATTGTAGTTCTCGCCGTGGTGACCATTCTTCTCTACTGCTACTTCTGGCGAAACTACTCTGCTAAACTAAAACAGCAAAACGGGTCGTCCAAGCTTCTGGAAAGCGAGAAGATCGTTTTTTCATCGAGCCCATACCCATCATCCCAACCCGGATTCGAGAGGGGTCGAATGGTGTTCTTCGAGGGGGTGAAGAGGTTCGAGCTAGAGGACCTGCTTCGAGCTTCTGCTGAAATGCTGGGAAAAGGGGGGTTCGGGACGGCGTACAAAGCGGTGCTTGATGACGGGTATGTGGTGGCTGTGAAGAGGTTGAAGGATGCTCAGATTGGAGGGAAGAGAGAGTTCGAGCAGCACATGGAAGTTCTGGGAAGGCTGAGGCATCCCAACGTTGTGAGCTTGAGAGCTTATTATTTTGCCAATGAGGAGAAATTGCTGGTCTATGATTTCATGCCCAATGGTAGCTTGTTTTCGCTCCTTCATGGGAACCGAGGACCCGGGAGAACCCCATTGGACTGGACCATAAGGCTCAAGATAGCGGCTGGAGTGGCACGAGGAATAGCCTTTATTCACAGCTCATGCAAACCGCTTAAGCTCACCCACGGTAACGTCAAATCTACGAACATCCTCATTGACAGGGAAGGAAACGCACGCGTGTCAGATTTTGGGCTCTCCACGTTCGCAATCCCGGCCCCAGCAGCTGCAGCAGCTCCCAGATCCAACGGCTACCGTGCTCCGGAAGCATTGGACGGTCGGAAGCATACCCAGAGATCCGACGTGTACTCCTTCGGCGTTCTCCTCCTGGAAATTCTCACAGGGAAGTGCCCCTCTGTGGTGGACACTGGTGGGCCCGGAAATGGCCACGGTGGCGGGGTGGTGGACCTCCCTAGATGGGTCCAGTCCGTGGTGAGGGAGGAATGGACGGCTGAGGTTTTTGATCTGGAGTTGATGAGGTACAAGGATATCGAAGAGGAAATGGTGGGGCTCCTCCAGATAGCCATGGCCTGTGCTGCGGCTGCACCTGATCAGCGACCCAAGATGAGCCACGTGGTCAAGATGATTGAGGAGATACGTGGGGTCGAAGTGTCGCCGTGTCATGACACGTTGGACTCCGTGTCTGACTCACCATCCTTGTCGGAAGACGCAAATTGCGGAGGTAGTTAG 2025 0.5225 MASPSNFVLRSSFFFFFFSLTFHFVLLVESSRNPDLEPLMAFKVVSDTHNKLTSWNSSTDPCTWAAVSCLKNRVTRLVLENLDLHGSIEPLTALTQLRVLSLKRNRFAGHITSLSNFTALKLLFLSHNEFSGEFPATISSLSRLYRLDLSHNNLSGKIPATVNHLTHLLTLRLDENKFSGHIPVLNLPNLQDFNVSGNFLSGQIPKPLSGFPKSSFSQNPSLCGAPLLACKNTAVDPGKPGSEGAIASPLMPRSNPSMSANETAPRTSTHHNGAPKMTRVTLIAIILGDIVVLAVVTILLYCYFWRNYSAKLKQQNGSSKLLESEKIVFSSSPYPSSQPGFERGRMVFFEGVKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGYVVAVKRLKDAQIGGKREFEQHMEVLGRLRHPNVVSLRAYYFANEEKLLVYDFMPNGSLFSLLHGNRGPGRTPLDWTIRLKIAAGVARGIAFIHSSCKPLKLTHGNVKSTNILIDREGNARVSDFGLSTFAIPAPAAAAAPRSNGYRAPEALDGRKHTQRSDVYSFGVLLLEILTGKCPSVVDTGGPGNGHGGGVVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQIAMACAAAAPDQRPKMSHVVKMIEEIRGVEVSPCHDTLDSVSDSPSLSEDANCGGS 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1545 674 ProSiteProfiles Protein kinase domain profile. 362 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1545 674 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Glsi09g1545 674 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 438 651 - -
Glsi09g1545 674 MobiDBLite consensus disorder prediction 652 674 - -
Glsi09g1545 674 MobiDBLite consensus disorder prediction 252 273 - -
Glsi09g1545 674 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Glsi09g1545 674 Gene3D Phosphorylase Kinase; domain 1 342 437 - -
Glsi09g1545 674 SUPERFAMILY L domain-like 53 229 - -
Glsi09g1545 674 Gene3D Transferase(Phosphotransferase) domain 1 438 657 - -
Glsi09g1545 674 SUPERFAMILY Protein kinase-like (PK-like) 366 642 IPR011009 -
Glsi09g1545 674 MobiDBLite consensus disorder prediction 239 273 - -
Glsi09g1545 674 FunFam pollen receptor-like kinase 1 335 437 - -
Glsi09g1545 674 Gene3D Ribonuclease Inhibitor 186 231 IPR032675 -
Glsi09g1545 674 Gene3D Ribonuclease Inhibitor 37 185 IPR032675 -
Glsi09g1545 674 MobiDBLite consensus disorder prediction 655 674 - -
Glsi09g1545 674 Pfam Protein kinase domain 366 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi09g1545 674 CDD STKc_IRAK 368 644 - -
Glsi09g1545 674 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 646 IPR046959 -
Glsi09g1545 674 Pfam Leucine Rich Repeat 144 164 IPR001611 GO:0005515
Glsi09g1545 674 FunFam Nuclear pore complex protein NUP107 32 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1545 Glsi-ChrGlsi09 12039860 12043125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1545 35 674 Receptor kinase-like Gene Family AT1G68400 66.922 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi09g1545 Pkinase 3.6e-38 CL0016