Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1539 ATGGACCTTCCCTTCAAAAACCTCCCGAGGGAGTTTGTGGTTGTCATAATGGGTGCCACTGGCACTGGTAAATCCAACCTTTCCATTGAGCTTGCCATCCTCTTGTTGAAGGAGTTTGGATTAGAGTCAGAAATCCTCAACTGTGACAAAATGCAAATCCATAAAGGCCTCAACAAAACCACCAACAAGGTTCCAGTTGATGAACGCAAAGGTGTGCCTCACCATCTTCTAGACGTGAAAGAAGCATTTGAGGACTTGTCACCCTCGGACTATCGCTCCATGGCTGAACCACTCATCTCAGAAATCAATGAACGGGGCAATATTCCGATTCTTGTTGGCGGTTCGAATTCGTGGATTCACGCGCTCTTGGTTGAACAATACGATCCTGCGTCGAGCTCCTTTTCCTCGGTGTTTAGATACGAGTGTTGTTTCCTGTGGTTGGACATGGAGTCATCAGTTTTATTGGATTATTCATCGGAGCGAGTTGATAAGCTACTTCACTCTGAAGATATACTCACAGAGTTGGCCGAGTTCTTCGACCCGGAAGCGAAAGATTTACAGCTTGGTTCAGTCGACACAGGGTTGAGGAAAGCCATCGGCGTGAAGGAGTTCGACCGGTATTTCAAAGAATATCCACCGCCCGAAGGACTGAACAGAGACTGGAAGGAGAACGAAGCTACGGTGCGAAAGGCCGCATACGAGGAGGCTGTGGGTGCGGTAAAGGAGAACACTTGTCGACTAGTTGAGCGGCAGATGGAGAAGATTCAAAAACATAAAGAGGCAGGTTGGGACCTATGGAAGTTTGATTGTACCACAGCGTTTGAGGCGCGGGGGACGTCCAAGGAGGCTGAATGCATGAAGAAGTTGCTGGAACGTAGCCTGGAGATTATCATGCCGTTTAGTGCAGATATTTTCAGAACATGGCACCTCATTGACATTTTGAGGATCAATTTGTCCAAAATAGCCAGTGTTGTAGAGAAGAAACTAAAAAAAACTTACAAAGATAATGATGATAGCTCAAAAGCAAATGCATGTGCAGTAATGGAATTTTGGAACCCTCGCCAATTTTGGAATATGAATTAG 1083 0.4598 MDLPFKNLPREFVVVIMGATGTGKSNLSIELAILLLKEFGLESEILNCDKMQIHKGLNKTTNKVPVDERKGVPHHLLDVKEAFEDLSPSDYRSMAEPLISEINERGNIPILVGGSNSWIHALLVEQYDPASSSFSSVFRYECCFLWLDMESSVLLDYSSERVDKLLHSEDILTELAEFFDPEAKDLQLGSVDTGLRKAIGVKEFDRYFKEYPPPEGLNRDWKENEATVRKAAYEEAVGAVKENTCRLVERQMEKIQKHKEAGWDLWKFDCTTAFEARGTSKEAECMKKLLERSLEIIMPFSADIFRTWHLIDILRINLSKIASVVEKKLKKTYKDNDDSSKANACAVMEFWNPRQFWNMN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1539 360 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 151 265 - -
Glsi09g1539 360 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 135 IPR027417 -
Glsi09g1539 360 Gene3D - 12 296 IPR027417 -
Glsi09g1539 360 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 13 294 IPR039657 -
Glsi09g1539 360 Pfam IPP transferase 52 125 - -
Glsi09g1539 360 Pfam IPP transferase 136 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1539 Glsi-ChrGlsi09 11950026 11951602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1539 139 271 C2H2 Transcription Factor Family AT2G27760 28.477 8.54e-06 45.4