Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1538 ATGCGCCTCCCCTTCGTGGTTGTCATAATGGGTGCCACTGGCACTGGCAAATCCGACCTTGCGATTGAGCTTGCCATCCTCCTGTTAAAGGCATTCGGATTAGAGGCAGAAATCATCAACTGTGACAAAATGCAAATCCATAAAGGCCTCAACAAAACCACCAACAAGGTTCCAGTTCATAAACGCAAAGGTGTGCGTCACCATCTTCTAGATGTGGAAGAACCATTTAAAGATTTTTCACCCTCAGATTATCGCGCCATGGCTCAATCATTCATCTCAGAAATTAATAAACGAGGTAATATTCCGATCGTTGTTGGCGGTTCGAATTCGTGGATTCACGCGCTCTTGGTTGAACAATACGATCCTGCGTCAAGCTGCTTTTCCTCGAAGTTCAGGTACCAGTGTTGTTTTCTGTGGTTAGACGTGGAATTACCTGTTTTATTAAGGTATTCACCGAAGCGAGTTGATAAGCTGCTTGAGTCTGAGGACATACTCACTGAGTTGGCCGAGTTCTTGGCCCTTGAAGCGAAAGATTTAGAGATTGACTCAGGGTTGATGAAAGCCATTGGCGTGAAGGAGTTCGTCGAGTATTTCAATAAATATCCACTGCCAGAAGGACTGAACAGAGAGTGGAAGGGCCAAGAAGATATGATGCGAAAGGCCGTTTACGAGAAGGCTGTGGGTGCGGTAAAGTTAAACACTTGTCGGCTAGTTAACCAGCAGATTGAGAAGATTCAGAAGCTTAAAGACGCAGGGTGGGAGCTACATAGGCTTGATGCCACGGCCGCCGTTGAAGCGCGTGGGCCGTCTATGAAGGCTAAATGCAGGAAGAAGTTGCTGAAACGTAGCCTGGAGAATGTCATGAAGTTTGTAAATTGA 879 0.4619 MRLPFVVVIMGATGTGKSDLAIELAILLLKAFGLEAEIINCDKMQIHKGLNKTTNKVPVHKRKGVRHHLLDVEEPFKDFSPSDYRAMAQSFISEINKRGNIPIVVGGSNSWIHALLVEQYDPASSCFSSKFRYQCCFLWLDVELPVLLRYSPKRVDKLLESEDILTELAEFLALEAKDLEIDSGLMKAIGVKEFVEYFNKYPLPEGLNREWKGQEDMMRKAVYEKAVGAVKLNTCRLVNQQIEKIQKLKDAGWELHRLDATAAVEARGPSMKAKCRKKLLKRSLENVMKFVN 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1538 292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 173 IPR027417 -
Glsi09g1538 292 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 144 255 - -
Glsi09g1538 292 Gene3D - 6 290 IPR027417 -
Glsi09g1538 292 Pfam IPP transferase 130 243 - -
Glsi09g1538 292 Pfam IPP transferase 45 118 - -
Glsi09g1538 292 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 6 282 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1538 Glsi-ChrGlsi09 11926812 11927690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1538 128 264 C2H2 Transcription Factor Family AT2G27760 31.410 9.18e-08 51.2