Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1537 ATGGGCCAATCTCTCATCGTGATTATCATAATGGGCGCCACTGGCACCGGCAAATCAGCCCTTTCCATTAAGCTTGCCAACCGATTGTTCAAGGAGTTCCGATTAAAGTCGGAAATCCTCAACTGTGACAAAATGCAAGTCCACAAAGGCCTCGACAAAACCACCAACAAGGTTCCAGTTCGTGAACGCAGAAGTGTGCCTCACCATCTTCTAGACGTGAAAGAACCGTTTGAGGACTTGTCACCCTCAGATTATCGCTCCATGGCTGAACCGCTCATCTCAGAAATCAATAAACGGGGCAATATTCCAATTCTTGTTGGCGGTTCGAATTCGTGGATTCACTCGCTCTTGGTTAAACGATGTGATCCCGCGTCGAGCTCCTTTTCCTCTGCGTTCAGGTACGAGTGTTGTTTTCTGTGGTTGGACGCGGAGTCGTCTGTTTTATTGGATTATTCATCGAAGCGAGTTGATAAGCTGCTTGAGTCTGGAGATATACTCAGAGAGTTGGCCGAGTTCTTGGCCCTTGAAGCGAAAGATTTAGAGCTTGACTCAGTACGCCGCACAGGGTTGATGAATGCCATCGGCGTCGTGGAGTTCGACCGGTATTTCAAAAAATATCCACTGCCAGAAGGACTGAACAGAGCGTGGAAGGGCCAAGAAGATATGGAGCGAAAGGCCGCATACGAGGAGGCTGTGGGTGCGGTAAAGGTGAAGACTCGTGGACTAGTTGGGCGGCAGATGGAGAAGATTCAAAAGCTTAAAGATGCTGGGTGGGACCTACAGAGGCTTGATGCTACTACGGCGTTGGAGGCGCGGCGGACGTCTACTAGGGCTGAATGGAGGAAGAAGTTGCTGAACCGTAGCCTGGAGATTGTCACGCCGTTCGTAGAGAAATTGGTGAAAGAGAAAAAAAGAGAATGGATTCAGCCTGAGTAA 936 0.4936 MGQSLIVIIIMGATGTGKSALSIKLANRLFKEFRLKSEILNCDKMQVHKGLDKTTNKVPVRERRSVPHHLLDVKEPFEDLSPSDYRSMAEPLISEINKRGNIPILVGGSNSWIHSLLVKRCDPASSSFSSAFRYECCFLWLDAESSVLLDYSSKRVDKLLESGDILRELAEFLALEAKDLELDSVRRTGLMNAIGVVEFDRYFKKYPLPEGLNRAWKGQEDMERKAAYEEAVGAVKVKTRGLVGRQMEKIQKLKDAGWDLQRLDATTALEARRTSTRAEWRKKLLNRSLEIVTPFVEKLVKEKKREWIQPE 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1537 311 Pfam IPP transferase 46 120 - -
Glsi09g1537 311 Pfam IPP transferase 133 248 - -
Glsi09g1537 311 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 179 IPR027417 -
Glsi09g1537 311 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 145 260 - -
Glsi09g1537 311 Gene3D - 7 295 IPR027417 -
Glsi09g1537 311 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 7 295 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1537 Glsi-ChrGlsi09 11916907 11917842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1537 130 297 C2H2 Transcription Factor Family AT2G27760 26.882 4.27e-09 55.5