Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1534 ATGAAGGAGATCATAGTTGTCATAATGGGAGCCACTGGCACTGGCAAATCCTACCTTTCAATTGAGCTTGCCATCCTCTTGTTGCAGGAATTCAAATTAGAGTCAGAAATAGTCAACTCTGACAAAATGCAAATCTATCGAGGCCTTAAAATAACCACCAACAAGGTTCCAGTTGAGGAACGCAAAGGTGTGCCTCACCATCTTCTCGACATAAAAGATCCGTTTGAGGAATTGTCACCCTCAGACTATCGCTCCATGGCTGAACAGCTCATCTCCCAGATCAATGAACGGGGGAAAATTCCAATTCTTGTTGGCGGTTCGAATTCGTGGATTCACGCACTCTTGGTTGAACGATACGATCCTGCGTCGAGCTGCTTTTCCTCGGTGTTCAGATACGACTGCTGTTTTCTCTGGTTGGACGTGGAGTCATCTGTTTTATTAGATTATTCATTGGAGCGGGTTGACAAGATACTTCACTCCGAAGATATACTCAGAGAGTTGGCCGAGTTCTTCGACCCGGAAGCGAAAGATTTAGAGCTTGACTCAGTGAGCCGCAAAGGATTGAGGAAAGCCATCGGCGTCGCGGAGTTCGACCAGTATTTTAAAAACTATGCACCGCCGGAAGCACTGAACAGAGAGTGGAAGGGGACAGAAGATATGCTGCGAAAGGCCGCATACGAGGAGGCTGTGGGTGCGGTGAAGGAGAACACTCGTCGGTTAGTTGAGCAGCAGATGAAGAAGATTCAAAAGCTTCAAGAGGTAGGCTGGGACCTACAGAGGCTTGATGCTACGGCGGCGTTTGAGGCGCGGGGAAAGAATGAGGAGGCTGAATGCAAAAAGAAGTTGCTGGAACGTAGCCTGGCGATTCTCACGCCGTTTGTAGAGAAATTGGTGACAGAAAAAAGAAGAGAAGAAATGGATTCAGCCTGA 930 0.4774 MKEIIVVIMGATGTGKSYLSIELAILLLQEFKLESEIVNSDKMQIYRGLKITTNKVPVEERKGVPHHLLDIKDPFEELSPSDYRSMAEQLISQINERGKIPILVGGSNSWIHALLVERYDPASSCFSSVFRYDCCFLWLDVESSVLLDYSLERVDKILHSEDILRELAEFFDPEAKDLELDSVSRKGLRKAIGVAEFDQYFKNYAPPEALNREWKGTEDMLRKAAYEEAVGAVKENTRRLVEQQMKKIQKLQEVGWDLQRLDATAAFEARGKNEEAECKKKLLERSLAILTPFVEKLVTEKRREEMDSA 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1534 309 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 123 IPR027417 -
Glsi09g1534 309 Gene3D - 2 293 IPR027417 -
Glsi09g1534 309 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 143 258 - -
Glsi09g1534 309 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 4 289 IPR039657 -
Glsi09g1534 309 Pfam IPP transferase 44 117 - -
Glsi09g1534 309 Pfam IPP transferase 131 246 - -
Glsi09g1534 309 Coils Coil 234 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1534 Glsi-ChrGlsi09 11867376 11868305 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1534 131 264 C2H2 Transcription Factor Family AT2G27760 30.921 5.31e-09 55.1